Transcript Information: S_Transcript_493252.p1


Annotated TAIR IDAT5G57000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23063870-23065203 | Reverse length=187
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.21445041957675
Condition 2: 8 Hour
Replicate 10.74390896455115
Replicate 20.52027554976108
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.26353269274822
Replicate 30.586559172212


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_493252.p1 GENE.S_Transcript_493252~~S_Transcript_493252.p1 ORF type:5prime_partial len:86 (+),score=2.81 S_Transcript_493252:2-259(+)
GTCATGTGGAGCTTTTTCGTCGACTGGTGTGTTCTCGTCAATGTCATCACTTGTCCCATGAGTTTCTTTTGTGATGACCTGGTGATTTTTTTGATGTTCATTTTAAAGATTAAACTTGATCAATTTTTAGTTGTTCAAGTAGTCTCTTCATTCTTATTTATTTTAGGGTTTGAGTTCATTCCATTGCTTGTATCTGATGAGTTGTTCGGGTTCGTCAATTCAATGTTAGGGTTTATCATTTTCCTAGCTTTTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_493252.p1 GENE.S_Transcript_493252~~S_Transcript_493252.p1 ORF type:5prime_partial len:86 (+),score=2.81 S_Transcript_493252:2-259(+)
VMWSFFVDWCVLVNVITCPMSFFCDDLVIFLMFILKIKLDQFLVVQVVSSFLFILGFEFIPLLVSDELFGFVNSMLGFIIFLAFI*

Click here to download the sequence:
Link to NCBI Protein BLAST