Transcript Information: S_Transcript_49352.p1


Annotated TAIR IDAT5G50900.1
Annotated Gene NameARM repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20705051-20706718 | Reverse length=555
E-Value1.4E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.180861541298
Replicate 212.194449180352
Replicate 313.758398963325
Condition 2: 8 Hour
Replicate 112.36600109444
Replicate 212.758386524573
Replicate 312.73502716336
Condition 3: 24 Hour
Replicate 15.5833568027078
Replicate 26.4081384169544
Replicate 36.8091461732662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49352.p1 GENE.S_Transcript_49352~~S_Transcript_49352.p1 ORF type:5prime_partial len:626 (+),score=59.26,Arm|PF00514.19|2.4e+02,Arm|PF00514.19|0.038,Arm|PF00514.19|1.5e+03,Arm|PF00514.19|75,Arm|PF00514.19|1.8e-05,Arm|PF00514.19|1.2e+03,Arm|PF00514.19|1.7e+03,Arm|PF00514.19|8.5e+02,Arm|PF00514.19|2.3,Arm|PF00514.19|4.2e+03,HEAT_2|PF13646.2|19,HEAT_2|PF13646.2|8.1,HEAT_2|PF13646.2|5.8,HEAT_2|PF13646.2|0.45 S_Transcript_49352:2-1879(+)
ATCAATGACAATATTTTTTTCCGGTCACCCTTTCTTTCTCCCCCAATTCCCCACCTTCCTACTTCTTGCCTGCATTTCTCCACTCATCTCATCTGTATCTCCTCTCTTTCTCTCTCTGGGTTCTTCTTCTTCAACCTCCAAACCCTAACTTCCCTAATCTCTTCTCGCTTTTTCTCTCTAAAAACCGCCATGAAAGAAGCTTCAAGCTCACCGGAGACCGACGACCTACTAAAAACCAACACAGAGCTTCTCTCCACTCTCCTAGACCTCCGCCTCCCTCTAGTCCATCACTTCAAATCCAAATGGTCGATCATTCGTACAAAACTCACAAACCTCCAATCAAAACTCACCGACCTTTCGGAATCGTCGCACTCTCTAACCTCAAACTCCCTCTCATCCTCCGTTCTCTCTTCTCTATCCGCAACCCTAACCTCCGCCGTCACTCTCGCCGGTAAATGCTCCGACTCCGACCACCTCGTCGACGGAAAACTCCGCACTCAAAACGACGTCGATTCTCTCTCCGCCAAACTCGACCACCACCTCCAGGACCTCGAGATCCTCCTCCGCAGTGGCCTCCTCCAAAACGACGCAGTTTCCGTCTCATCTCAAACAGTCCCCCCGAGAGAAGCGATTAGGGTTGAGGTACGAAACCTCCTGACTCGGTTGCAAATCGGCGAGTCGGACTCAAAGAACTCGGCAATCGACTCGCTCTTAGCGTTATTAAATCAAGACGACAAGAACGTGTTGATCGCTGTGGCGCAGGGGGTGGTCCCGGTGTTGATAAAGCTCCTCGACGCGACGTCGTTTGAGATGAGAGAGAAATCGGTTGCTCTAATCGCTAGGGTTTCGACGGTCGAGAGCACTAGACACGTGTTAATCTCCGAGGGGCTGATGTTATTAAACCACCTAATCAGAGTGATTGAATCAGGGAGTGTTTTCGCTAAAGAGAAAGCCTGTGTAGCTCTACAAGCCTTGAGCTTCTCCAAAGAAAACTCCAGAGCAATCGGCTGCCGAGGTGGCATTTCTTCATTATTAGAAATCTGCCACGGTGGGACCCCCAGCTCGCAGGCCACGTCAGCCGGCGTGCTGAGGAACCTGGCCCATTTCGACGAGATCAAGGAGAATTTCGTGGAGGAGAATGCCATTCCAGTGCTGGTGAATCTTGTTCTATCAGGGACGGCTTTAGCGAGGGAGAATTCCTTGTGGTGTCTCTCGAATCTTGTTCGCAATGACGAGACCTTGAAGGTTTTGGTTGCTAGGGAAGGTGGAGTTGAGTGCTTGAGAAATTACTGGGATTCGACTCCGGTGGGGAGAGAATTAGAGCCGGCTGTTGAGTTGCTAAGGAATCTATCGTCGTACAATCCGATTGGGGAAGTCCTGATTGTACAAGGTTTTCAATTGAGGTTACTGCCATTGTTGAATTGTGGGGTTTTGAGTGTCAGGATAGCGGCAGCTGAGGCGGTGTACGAGCTGGGTTACTGCACGAGGGCGAGGAGGGAGATGGGAGAGGCCGGGTGTGTGACCGCCCTCGTTAGGATGCTCGACGGGAAGGCCTTGGAGGAGAGAGAAGCAGCCTCGAAAGGGCTGTCAAGGTTGTTGGAGTGTAATTGTAATAGGAAGATTTTCAAGAAAGAGGAAAGGGGCATTGTGGGTACAGTTCAGTTGTTAGACCCATTGACTAAGAACTTGGATAAGAAATGGGCTATTGGGGCGTTGGGGTGTTTAGTTGGCTCCAAGAAGTGTAGGAAACAAATGGTGGCTGCTGGTGCTTGTGTTTACTTGCAAAAGCTTGTTGAGTTGGATCATGTTGATGGCGCTAAGAAGCTTCTTGATTGTCTTGGAAAAGGCAAGATTTGGGGCGTCTTCGCTCGACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49352.p1 GENE.S_Transcript_49352~~S_Transcript_49352.p1 ORF type:5prime_partial len:626 (+),score=59.26,Arm|PF00514.19|2.4e+02,Arm|PF00514.19|0.038,Arm|PF00514.19|1.5e+03,Arm|PF00514.19|75,Arm|PF00514.19|1.8e-05,Arm|PF00514.19|1.2e+03,Arm|PF00514.19|1.7e+03,Arm|PF00514.19|8.5e+02,Arm|PF00514.19|2.3,Arm|PF00514.19|4.2e+03,HEAT_2|PF13646.2|19,HEAT_2|PF13646.2|8.1,HEAT_2|PF13646.2|5.8,HEAT_2|PF13646.2|0.45 S_Transcript_49352:2-1879(+)
INDNIFFRSPFLSPPIPHLPTSCLHFSTHLICISSLSLSGFFFFNLQTLTSLISSRFFSLKTAMKEASSSPETDDLLKTNTELLSTLLDLRLPLVHHFKSKWSIIRTKLTNLQSKLTDLSESSHSLTSNSLSSSVLSSLSATLTSAVTLAGKCSDSDHLVDGKLRTQNDVDSLSAKLDHHLQDLEILLRSGLLQNDAVSVSSQTVPPREAIRVEVRNLLTRLQIGESDSKNSAIDSLLALLNQDDKNVLIAVAQGVVPVLIKLLDATSFEMREKSVALIARVSTVESTRHVLISEGLMLLNHLIRVIESGSVFAKEKACVALQALSFSKENSRAIGCRGGISSLLEICHGGTPSSQATSAGVLRNLAHFDEIKENFVEENAIPVLVNLVLSGTALARENSLWCLSNLVRNDETLKVLVAREGGVECLRNYWDSTPVGRELEPAVELLRNLSSYNPIGEVLIVQGFQLRLLPLLNCGVLSVRIAAAEAVYELGYCTRARREMGEAGCVTALVRMLDGKALEEREAASKGLSRLLECNCNRKIFKKEERGIVGTVQLLDPLTKNLDKKWAIGALGCLVGSKKCRKQMVAAGACVYLQKLVELDHVDGAKKLLDCLGKGKIWGVFARP*

Click here to download the sequence:
Link to NCBI Protein BLAST