Transcript Information: S_Transcript_49450.p1


Annotated TAIR IDAT5G51545.1
Annotated Gene Namelow psii accumulation2
Annotated Gene Symbol(s)LPA2
Annotation TypeOrtholog
Chromosome Positionchr5:20936434-20937243 | Forward length=185
E-Value5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.490808452801
Replicate 252.467728400458
Replicate 362.576845815998
Condition 2: 8 Hour
Replicate 144.772710019055
Replicate 244.743697279453
Replicate 350.373271703314
Condition 3: 24 Hour
Replicate 154.123144170726
Replicate 248.146505189554
Replicate 360.231747833113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49450.p1 GENE.S_Transcript_49450~~S_Transcript_49450.p1 ORF type:5prime_partial len:201 (+),score=50.22 S_Transcript_49450:2-604(+)
AACATGGCACTACTACCTCTTCAATCATCTTGCATCACCAACAAACCTCATCATCACCATCATCTCTACAAATCTCTCTCCTACCTACACATCACAAGACCCAAACTCACCATAACCTCTCAAGATTCGTCATCATCTTCACAATCCTCAAAACCCACCATTGAAGAACCACCTTCAAGCAAAAACCCCATTTCATCTGGACAAGGATTTGGGTCTGGGTCAGCCCAATTAGCCAAACCAAATGCAAGCCCAACAACTGGAAAGAAGAAACAAAAGGGCAAAAGAGAGAGGGCTTCCATCATACGGAGATCTCCTGTAGAAAAGCCAGCTTTTTTGGATAAGAAACAAGAGGAGCAAATTAAAGAGCAGTCTTTGAATGAGAATGCCTTTTTGCTTACTTGGTTGGGCCTTGGTGGCCTCATTCTTGTTGAGGGCATTGCTCTTGCTGCCTCAGGGTTCCTGCCAGAAGAGTGGGATAAGTTGTTTGTGAAGTTTCTCTACCCATCATTTACACCAACAGTCTTCCTGTTTGTTGCTGGAACAGTCGCGTACGGTGTTTTCAAGTACCTACAGAATGAGAATGTGAGGAACCCAAATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49450.p1 GENE.S_Transcript_49450~~S_Transcript_49450.p1 ORF type:5prime_partial len:201 (+),score=50.22 S_Transcript_49450:2-604(+)
NMALLPLQSSCITNKPHHHHHLYKSLSYLHITRPKLTITSQDSSSSSQSSKPTIEEPPSSKNPISSGQGFGSGSAQLAKPNASPTTGKKKQKGKRERASIIRRSPVEKPAFLDKKQEEQIKEQSLNENAFLLTWLGLGGLILVEGIALAASGFLPEEWDKLFVKFLYPSFTPTVFLFVAGTVAYGVFKYLQNENVRNPNE*

Click here to download the sequence:
Link to NCBI Protein BLAST