Transcript Information: S_Transcript_494612.p1


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42580801976289
Replicate 20.52950694938036
Replicate 30.59016755467522
Condition 2: 8 Hour
Replicate 10.17060312253706
Replicate 20.17897478911781
Replicate 30.51158034251955
Condition 3: 24 Hour
Replicate 10.52427720377426
Replicate 20
Replicate 30.40355271048186


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_494612.p1 GENE.S_Transcript_494612~~S_Transcript_494612.p1 ORF type:complete len:125 (+),score=20.71,zf-RVT|PF13966.2|4.4e-06,zf-RVT|PF13966.2|1e+03 S_Transcript_494612:722-1096(+)
ATGGAAGCCTTCCTGGCAGCTAATCTTGAGGCAAGAGGTGTTCTTGTGGTAAATTTGTTCCCTCTATGTTTAGAGGAGGAAGAAACAGAAGAACACTTGTTTTTATTCTGTCAATTTGCGAAAAGGAATTGGAAAGCGAGTAATCTGGGTATAAACCTTGATGCCAATGTGACTGCCAAGCTTCAAGACTGGATTATGGACTGGGTTCTATATCTGTGGAAGGAGAAAAGGAGAGAACCAGTGCAACTGTTGGTGGCTATCCTATGGGCAATTTGGAATCATAGGAATAGCATTGTCTTCAGGGGAGAGACATCACAACCAATCCGGGTAATGGAAGCCATTGATATGTACATGAATCAATGTAATATGGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_494612.p1 GENE.S_Transcript_494612~~S_Transcript_494612.p1 ORF type:complete len:125 (+),score=20.71,zf-RVT|PF13966.2|4.4e-06,zf-RVT|PF13966.2|1e+03 S_Transcript_494612:722-1096(+)
MEAFLAANLEARGVLVVNLFPLCLEEEETEEHLFLFCQFAKRNWKASNLGINLDANVTAKLQDWIMDWVLYLWKEKRREPVQLLVAILWAIWNHRNSIVFRGETSQPIRVMEAIDMYMNQCNMG*

Click here to download the sequence:
Link to NCBI Protein BLAST