Transcript Information: S_Transcript_49493.p1


Annotated TAIR IDAT2G45500.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18749973-18752636 | Reverse length=491
E-Value7E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5443752573293
Replicate 24.6401898672551
Replicate 34.1715712570049
Condition 2: 8 Hour
Replicate 17.5738985451722
Replicate 27.8567801770468
Replicate 37.993442851868
Condition 3: 24 Hour
Replicate 14.5943604166726
Replicate 24.3169164907328
Replicate 33.9534553730242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49493.p1 GENE.S_Transcript_49493~~S_Transcript_49493.p1 ORF type:complete len:504 (+),score=110.53,AAA|PF00004.25|5.4e+03,AAA|PF00004.25|1.1e-39,RuvB_N|PF05496.8|3.4e-05,RuvB_N|PF05496.8|53 S_Transcript_49493:253-1764(+)
ATGAGCTTCTTGAAAGGATTGGCTGATTCGCTGAACTCAATATTCTCAAATTCGGGTCCTTTATATGAATCGAGCAACAACAACAACAACGAGTACCCTAATAATTCCTCAATTGATCCTACTACTACTACTACCAGTACGATGGATGGTGTTGCGCTAGATGGAAGTTCCGTCACCAATGAAAAGACTGCGTTTAAGCTGAAAGGGTACTTCGATTTAGCAAAAGAGGAGATCGCTAAGGCGGTTAGGGCTGAAGAATGGGGTTTGCTTGATGATGCTCTTTTGCATTATAGGAATGCTCACCGTATTCTCTCTGAAGCCTCCTCCACACGTGCCCCCTCTTTTATCTCCCCTAGTGAACAAGAAAAGGTGAATTCTTATCATCAGAAGATTTCAAAATGGCGGGGGCAAGTTTCCGAGAGACTCCAAGCCTTGAGCAGACGAGCAGGTGGCAGAACTACAGACAAGATTATTCCTTCATGTTCCCAAGGTGTTAAAGTTTGGTCGAAATCATCAAATAGTGTAAAAGGTGTTCAACAGAAACCCCCAACTTTAACTGGCAGCAGTTCAATATTGGGACATCGAACAGCTAAAACATCGAACAGCAGTTCAAGCCAAGATAGTAGCTATGATGCAAAACTAGTCGAAATGATAAACACTGCAATTGTGGACAGAAGTCCTTCTGTTAAATGGGATGATGTAGCTGGTCTTGATAAGGCAAAGGAAACTTTGTTTGAAATGGTTATCCTGCCTACAAAAAGGAGAGATTTGTTCACAGGCCTTAGAAGGCCCCCAAGAGGTTTGCTTCTTTTTGGTCCTCCGGGTAATGGAAAAACGATGCTTGCCAAAGCAGTTGCTTCAGAGTGTAATGCAACATTTTTCAATGTGTCTGCATCTACCCTGACATCTAAGTGGGTTGGTGAGGGTGAAAAGCTTGTACGGACCCTATTCATGGTTGCTGTCTCAAGGCAGCCTTCAGTGATTTTTATGGATGAAATTGATAGCATTATGTCTTCGAGGGAGGCTAATGAACATGATGCCAGTCGAAGGTTGAAGTCAGAGTTTCTTGTTCAATTTGATGGAGTCAACTCTAATCCTGATGATCTGGTGATAGTAATTGGTGCAACTAACAAGCCACAAGAACTGGATGAGGCAGTTCTAAGGAGATTGGTCAAGAGAATATACATACCATTACCTGATGAAAACGTGAGAAGGCTTGTTCTTAAAACAAAACTGAAGGGCCAAGCCTTTTCCTTGCCTCGTGAAGATTTAGAAAGACTTGTGAGAGAGACAAAAGGATACTCTGGAAGTGACCTGCATGCCTTGTGTGAAGAAGCTGCCATGATGCCAATAAGAGAGCTTGGTCCAAACATATTAACTGTCAAACCTAATCAGGTCCGATCTCTGAGATATGAAGACTTTCAGAAGGCAATGACTGTGATTAGACCGAGTTTACAGAAGAGCCGGTGGGAGGAGCTTGAACAGTGGAACACAGAGTTTGGATCTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49493.p1 GENE.S_Transcript_49493~~S_Transcript_49493.p1 ORF type:complete len:504 (+),score=110.53,AAA|PF00004.25|5.4e+03,AAA|PF00004.25|1.1e-39,RuvB_N|PF05496.8|3.4e-05,RuvB_N|PF05496.8|53 S_Transcript_49493:253-1764(+)
MSFLKGLADSLNSIFSNSGPLYESSNNNNNEYPNNSSIDPTTTTTSTMDGVALDGSSVTNEKTAFKLKGYFDLAKEEIAKAVRAEEWGLLDDALLHYRNAHRILSEASSTRAPSFISPSEQEKVNSYHQKISKWRGQVSERLQALSRRAGGRTTDKIIPSCSQGVKVWSKSSNSVKGVQQKPPTLTGSSSILGHRTAKTSNSSSSQDSSYDAKLVEMINTAIVDRSPSVKWDDVAGLDKAKETLFEMVILPTKRRDLFTGLRRPPRGLLLFGPPGNGKTMLAKAVASECNATFFNVSASTLTSKWVGEGEKLVRTLFMVAVSRQPSVIFMDEIDSIMSSREANEHDASRRLKSEFLVQFDGVNSNPDDLVIVIGATNKPQELDEAVLRRLVKRIYIPLPDENVRRLVLKTKLKGQAFSLPREDLERLVRETKGYSGSDLHALCEEAAMMPIRELGPNILTVKPNQVRSLRYEDFQKAMTVIRPSLQKSRWEELEQWNTEFGSN*

Click here to download the sequence:
Link to NCBI Protein BLAST