Transcript Information: S_Transcript_49527.p1


Annotated TAIR IDAT4G00200.1
Annotated Gene NameAT hook motif DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:82653-84104 | Reverse length=318
E-Value5.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1987838394225
Replicate 21.4576017125085
Replicate 32.3814944492337
Condition 2: 8 Hour
Replicate 12.1133269683645
Replicate 21.6123854875479
Replicate 31.9203466310794
Condition 3: 24 Hour
Replicate 11.1808045130051
Replicate 21.4973088729118
Replicate 31.5905793768992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49527.p1 GENE.S_Transcript_49527~~S_Transcript_49527.p1 ORF type:complete len:333 (+),score=82.66,DUF296|PF03479.11|3.4e-27 S_Transcript_49527:183-1181(+)
ATGTCAGGATCTGAAACAGGGATGGTGATAAACATGCAGCAAAAAAGTCAACTTAATAATAATAATAATAGTAGTAATAATAATAGCACTTCAACTCCTTCACAGCCGGTGATACATAACATGCATTTGGAATACGCCGCCGATGGAACTGCCGTATACAGGCCGGTTGCCGGTAATGGCAACGGGAATGCTGCTGAGGGTGAGTGTATGAACATAAACATGGGAATGGGAATGGGTATGAGCATGGGTATGGGTATGGGAGGCGGTGAGCCTGTAAAGAGGAAAAGAGGAAGGCCCAGAAAGTATGGTCCTGATGGCTCTATGGCGGTCCCTCCTTCGTCTGCTCCCCCTCCACCCTTTTCTCAGCCTCCTCCAGCTCAACAGCAGCCGCCAGCTCACCACCAGCAACTTCCAGCTCACCACCAGCAACTGCCAGCTCAACAGCAGCAGCAACCTCAGCAGCAGCTTCCTGTTGGTGGCGGTGGAGGTGGTTCGGGGTCTCCTCCGCCTACAGTCAAGAAGGCTAGAGGGAGACCTCCTGGTTCTAGCAAGAAGCAGCAAGTTGAATATCTTGGATCGCTTGGGATTGGCTTTACTCCACATGTCATTACTGTGAAAGCTGGCGAGGATGTGGCTTCTAGAATCATGTCATTCTCTCAAAATGGTCCGAGGGCTATATGCATTCTTTCTGCTAACGGTGCCATATCACATGTGACTCTTCGTCAAGCGGCAACATCGGGTGGCTCAGTCACATACGAGGGGTGCTTTGAAATATTGTCGCTCTCAGGTTCCTTCATGCTTTCAGATAGTGAGGGTCAGCGTAGCAGGACTGGTGGCTTAAGTGTTTCTTTAGCTGGGCCTGATGGTCGTGTCTTAGGAGGTGGAGTGGCTGGTCTCTTAACAGCTGCATCGCCTGTGCAGGTGTTGACTATCAAGATAACGATGAAACTTAGTTGTCTTGTCGTACATGGAGCAACTGATCCCATCTTGTACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49527.p1 GENE.S_Transcript_49527~~S_Transcript_49527.p1 ORF type:complete len:333 (+),score=82.66,DUF296|PF03479.11|3.4e-27 S_Transcript_49527:183-1181(+)
MSGSETGMVINMQQKSQLNNNNNSSNNNSTSTPSQPVIHNMHLEYAADGTAVYRPVAGNGNGNAAEGECMNINMGMGMGMSMGMGMGGGEPVKRKRGRPRKYGPDGSMAVPPSSAPPPPFSQPPPAQQQPPAHHQQLPAHHQQLPAQQQQQPQQQLPVGGGGGGSGSPPPTVKKARGRPPGSSKKQQVEYLGSLGIGFTPHVITVKAGEDVASRIMSFSQNGPRAICILSANGAISHVTLRQAATSGGSVTYEGCFEILSLSGSFMLSDSEGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVLTIKITMKLSCLVVHGATDPILYN*

Click here to download the sequence:
Link to NCBI Protein BLAST