Transcript Information: S_Transcript_49575.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29735196910816
Replicate 20.61627903791941
Replicate 31.4424486322369
Condition 2: 8 Hour
Replicate 11.5487713638141
Replicate 23.4995070497896
Replicate 32.3816589502773
Condition 3: 24 Hour
Replicate 11.4644614630566
Replicate 20.88629430745493
Replicate 31.1272422080499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49575.p1 GENE.S_Transcript_49575~~S_Transcript_49575.p1 ORF type:complete len:179 (+),score=30.10,RVT_3|PF13456.2|1.7e-07 S_Transcript_49575:394-930(+)
ATGATGGTGTTTCTACTAGTGCTGATGCATGGATCCCATCACTTGAAATTGGCAATACTCCTAGTACTAGACTTGTGCAAACCAGTCGCATGTGAGCACATAGCTAAGGCTGTCAGAGCTGGTGATGCTGTAGTACCGATGGCCTTCCGTCCTAACATGACAATTGATTTACGCAGGTCATTCACCTCCAAGGAGCCTTGTTATAGTTGGAAACCCCCAGCAAGTGAGTTTGTCAAGCTCAATGTGGCTGGTTCTGTTCATAAGAAGCCCCCAGGTGCTGCAGGGGGCGGTGTCATTCGTTACTCTGCAAGCATCTGGGTTTATGGCTTCACAATCAGACTGCAGCTTTCGTCGCCTGTTTCTGCGGAGGTGCTGACCTTAAGGGAGGGACTGCGTGTTGCTTGGGAATGCAACTTGAAAAAAGTGGAGGTAAAATGTGATGCTTTGGGTGTGGTTGAACTTCTAAAAGAGCCCGAGATGAGAAGGCTCTTTTTGGTGCTGTTTTTGGAGATATTATTAGCTGTATCAATTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49575.p1 GENE.S_Transcript_49575~~S_Transcript_49575.p1 ORF type:complete len:179 (+),score=30.10,RVT_3|PF13456.2|1.7e-07 S_Transcript_49575:394-930(+)
MMVFLLVLMHGSHHLKLAILLVLDLCKPVACEHIAKAVRAGDAVVPMAFRPNMTIDLRRSFTSKEPCYSWKPPASEFVKLNVAGSVHKKPPGAAGGGVIRYSASIWVYGFTIRLQLSSPVSAEVLTLREGLRVAWECNLKKVEVKCDALGVVELLKEPEMRRLFLVLFLEILLAVSIS*

Click here to download the sequence:
Link to NCBI Protein BLAST