Transcript Information: S_Transcript_49594.p1


Annotated TAIR IDAT5G38720.1
Annotated Gene Nameunknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15508417-15510472 | Reverse length=306
E-Value6E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1807816247691
Replicate 22.6354868072117
Replicate 33.90255848868
Condition 2: 8 Hour
Replicate 15.2403689516504
Replicate 24.0467849075273
Replicate 34.437770320491
Condition 3: 24 Hour
Replicate 11.6402301597033
Replicate 22.7072812463214
Replicate 31.2051488794253


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49594.p1 GENE.S_Transcript_49594~~S_Transcript_49594.p1 ORF type:complete len:293 (+),score=94.66,RRP7|PF12923.3|2.2e+03,RRP7|PF12923.3|4.8e+03,RRP7|PF12923.3|1.7e-34 S_Transcript_49594:105-983(+)
ATGGGAAGTAATAAGCCAGAAAAGAGGACCAAGAAGACCAAAAAACGTCGCAAATCAGAGCTAGAGATTGCCCCAGATGATCAAAGTACAGTTGATGCAAGCCCAACAAAGTACAAAGACAGGTCTCCAACTATTGATAAAAATGGGGATGCCGCTGCTGGTGCAGGCGTCACAACTAGTTCTTCTCTCCTCCCCCCTTTCTATGTAGAGAAGTCAAAGAAAGCATGTAGAAACCAGAAGAAAAATACCATTATTTTAAGTGAACTTAAGGAGGCTGCAAGCAAGGGAGAACTTGAACCAGATTCAGAGCATTGCTCAAGAGTGAAAAAAGGCAAGTTGAAGAAAGCTCTCAAATGCAAGGAGCGCCGATTGTCAAATAAAGAAAGCAAGTCAGCACAGGAGGCGCAGGAGATGCAAGAAGTTAAAAGGCAGGATGTTTATCCGATCTCTTCAGGAGAGGATAATAGCTCTCAAGGGATGAAAAAATGGATTAAGGAATACCATGAGAAGAGACCTGGGCTGAACATGCTGCAGCAAAGAATTGATGACTTTATAACTTCGCATGAGGAGCAGGAGGAGCAGGCTAGAAAGGACAGAGAGGCCAAAATTGCTGAGGAGGGGTGGACTGTTGTTGTACACCGTAAGGGTGGAAAAAAGACAGCTGATCCTGAGAGTGGTGTTGCTGTGGGCTCTGTGGCAGAGGCTGCTGTGCGTGATAAGATGGCCAAGAAAAAGAGCAAGGATGTGGGGCTTGATTTCTATCGGTTTCAAAGGAGAGAAGCCAAGAGAAATGAGATTATGCAGCTGCAAAGTAAGTTTGAGGAGGACAAGAAGCGGATACAGCAATTACGAGCGGCAAGGAAGTTTAGACCTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49594.p1 GENE.S_Transcript_49594~~S_Transcript_49594.p1 ORF type:complete len:293 (+),score=94.66,RRP7|PF12923.3|2.2e+03,RRP7|PF12923.3|4.8e+03,RRP7|PF12923.3|1.7e-34 S_Transcript_49594:105-983(+)
MGSNKPEKRTKKTKKRRKSELEIAPDDQSTVDASPTKYKDRSPTIDKNGDAAAGAGVTTSSSLLPPFYVEKSKKACRNQKKNTIILSELKEAASKGELEPDSEHCSRVKKGKLKKALKCKERRLSNKESKSAQEAQEMQEVKRQDVYPISSGEDNSSQGMKKWIKEYHEKRPGLNMLQQRIDDFITSHEEQEEQARKDREAKIAEEGWTVVVHRKGGKKTADPESGVAVGSVAEAAVRDKMAKKKSKDVGLDFYRFQRREAKRNEIMQLQSKFEEDKKRIQQLRAARKFRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST