Transcript Information: S_Transcript_49612.p1


Annotated TAIR IDAT3G59040.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21821495-21823919 | Reverse length=590
E-Value5E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.135517681005
Replicate 241.230815946136
Replicate 345.158543495483
Condition 2: 8 Hour
Replicate 156.981140439574
Replicate 260.530923801814
Replicate 357.976081961066
Condition 3: 24 Hour
Replicate 141.40457526852
Replicate 240.344799330945
Replicate 342.841699539187


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49612.p1 GENE.S_Transcript_49612~~S_Transcript_49612.p1 ORF type:complete len:564 (-),score=136.35,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|7.3e-06,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|2.1e-05,PPR|PF01535.16|0.0014,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|0.012,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.1e-07,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|16,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.0089,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|29,PPR_1|PF12854.3|7.6e+02,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|0.083,PPR_1|PF12854.3|3.2e-05,PPR_1|PF12854.3|0.0083,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|2.1,TPR_14|PF13428.2|5.8e+02,TPR_14|PF13428.2|7.5e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|9.5e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.4e+04,TPR_16|PF13432.2|1.9,TPR_16|PF13432.2|9.2,TPR_16|PF13432.2|3.9,TPR_16|PF13432.2|1.1e+04 S_Transcript_49612:16-1707(-)
ATGCCTCATGCCTTAATTTTGAAGCCTTTCATTTCTGTCCCACCTTCATTTTCGTTCAGAAAGCAGGATGCACATGGAAACTTGTGTCATATCAACTTTAAGAAGTACAAAAAGCTACAGGTTGTTTGTCTTGGTATGTTGGCGCCAAGAAAGTTTATGCAGAAGAGGAAGAAAGTTGAACATTTCAAAGATGCAGCTGATGAAGCAGATCAGAAGAACTGGAGAAGACTGATGCAAGAAATAGAGGAAACAGGTTCTGCGGTTTCAGTTTTGAGAAACCGAAGGGCTTCCAGTGATACTCTTCCTAAAGACCTTGTTGTGGGAACATTGGTTAGATTAAAGCAGTTGAAGAAATGGCATCTTGTTAGTGAGATTCTTGAATGGCTCAGGACTCAGCATTGGTGGGACTTCAATGAGATGGATTTTTTGATGCTTATCACAGCTTATGGAAAACAAGGGAATTTCACAAAAGCGGAGAAGGTGTTGGGCTACATGAACAAGAAGGGCTTTCCTCCAAATGTGGTATCCTACACTGCTCTTATGGAGGCATATGGAAGAGGCGGCCAATACAATAATGCTGAGGCTGTGTTTAGAAGGATGCAGACTTCAGGCCCTGAACCTTCTGCTGTAACCTATCAACTAATCCTCAAGATATTTGTTGAGGGGGGCAAGTTTAAGGAGGCTGAAGATATTTTTCTTGATCTAATGAATGATGAGAAATCGCCTTTGAAGCCAGATCAGAAAATGTTCCATATGATGATATATATGCATAAGAAGGCTGGAAGCTATGAGAAGGCTCATAAACTCTTCTGCCTGATGGCTGAGCGAGGAGTTGAACGGTCTACTGTCACTTTTAATAGTCTAATGTCATTTGAAACCAATTATAAGGAAGTTTCCCGCATATATGACCAGATGCAAAGTGTGGGGCTCAAACCAGATGTTGTGAGTTATGCCTTACTCATCAATGCTTATGGGAAAGCTAGACGAGAGGAGGAGGCATTAGCAGTTTTTGAGGAGATGTTAGATGCAGGTGTTAGGCCAACACATAAAGCTTACAATATACTACTTGATGCTTTTGCTATCTCGGGAATGGTGGAGCAAGCGCAGACTGTGTTCAAGTGCATGAGACGAGATAGGTTTACCCCAGATCTCTGCTCTTATACAACAATGTTGTCAGCATACATTAATGCATCTGACATGGATGGAGCTGAAAATTTTTTCAAGAGATTGAAACAAGACGGCCTTGAACCCAATGTTGTCACTTATGGGACATTGATGAAAGGCTATGCAAAAGTAAGTGATTTGGAAAAGATGATGGAAAAGTATGAAGAAATGATAACACGTGGGATCAAAGCAAATCAAACTATTTTCACCACAATTATGGATGCATATGGTAAGAATGGAGATTTTGGCAGTGCTTTGTTTTGGTTTAAGGAGATGAAAGGTCATGGATGCTCTCGTGATCAAAAGGCAAAGAATGTCCTCCTTTCACTGGCTCAAACAGAAGAAGAACGGGAGGAAGCTAATCAACTGCTGAAAACTAAAACGAGTGATCAACCTTGTAGGTTTTCCGATTATAATAGTGATGATGATGATGATGGTACAGGTGACAGTGACTATTCTGACGATGATGAGAGGATATCATCCGGAAGTCATGAAGAGCAGGATGAGTTAATGCTTAGCCGAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49612.p1 GENE.S_Transcript_49612~~S_Transcript_49612.p1 ORF type:complete len:564 (-),score=136.35,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|7.3e-06,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|2.1e-05,PPR|PF01535.16|0.0014,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|0.012,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.1e-07,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|16,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.0089,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|29,PPR_1|PF12854.3|7.6e+02,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|0.083,PPR_1|PF12854.3|3.2e-05,PPR_1|PF12854.3|0.0083,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|2.1,TPR_14|PF13428.2|5.8e+02,TPR_14|PF13428.2|7.5e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|9.5e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.4e+04,TPR_16|PF13432.2|1.9,TPR_16|PF13432.2|9.2,TPR_16|PF13432.2|3.9,TPR_16|PF13432.2|1.1e+04 S_Transcript_49612:16-1707(-)
MPHALILKPFISVPPSFSFRKQDAHGNLCHINFKKYKKLQVVCLGMLAPRKFMQKRKKVEHFKDAADEADQKNWRRLMQEIEETGSAVSVLRNRRASSDTLPKDLVVGTLVRLKQLKKWHLVSEILEWLRTQHWWDFNEMDFLMLITAYGKQGNFTKAEKVLGYMNKKGFPPNVVSYTALMEAYGRGGQYNNAEAVFRRMQTSGPEPSAVTYQLILKIFVEGGKFKEAEDIFLDLMNDEKSPLKPDQKMFHMMIYMHKKAGSYEKAHKLFCLMAERGVERSTVTFNSLMSFETNYKEVSRIYDQMQSVGLKPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAQTVFKCMRRDRFTPDLCSYTTMLSAYINASDMDGAENFFKRLKQDGLEPNVVTYGTLMKGYAKVSDLEKMMEKYEEMITRGIKANQTIFTTIMDAYGKNGDFGSALFWFKEMKGHGCSRDQKAKNVLLSLAQTEEEREEANQLLKTKTSDQPCRFSDYNSDDDDDGTGDSDYSDDDERISSGSHEEQDELMLSRT*

Click here to download the sequence:
Link to NCBI Protein BLAST