Transcript Information: S_Transcript_496394.p1


Annotated TAIR IDAT1G27990.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9752799-9753919 | Reverse length=271
E-Value1E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19568383261162
Replicate 20.40556598451314
Replicate 30.13560835355589
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.32124828662638
Replicate 20.49993702006649
Replicate 30.18545620886115


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_496394.p1 GENE.S_Transcript_496394~~S_Transcript_496394.p1 ORF type:3prime_partial len:272 (+),score=16.12 S_Transcript_496394:178-990(+)
ATGTCAGGTGTATCCCTTGCGGTGGCTCCTCGTAGTGAGCCAGACAAAGCCACAATGCCAGCCTCAAACCTCGAAGCCAAGCCCTTCCAATCAAAACACCAGCAACAAACCAGCACCACCACCACAGGAATAATGGGATCGTTGCGTGTTATAGAGCTACAACTAGTGGCCTTCATAATGGTCTTCTCTGTTAGTGGCCTAGTACCGCTCCTTGATCTCGTCTTCCCTGCCTTTGCCTCCGCTTACATAATAGCCCTCTCGCGTTTTGCCTTCCCTGCCCACAACAATATTCGATCCAGCTCCCCCGAGCTCTTTCAGGGGAGTAGACTTTTCCGGCTCTACGTTATTTTAGGAACTTCGGTGGGCTTATTTTTGCCCCTTGCATATGTCCTAGGAGGATTTGCAAGAGGGGATGACCATGCTGTGAGGTCAGCCACGCCTCACTTGTTCTTGCTTTCGTTCCAAATACTGACCGAGAATATAATTAGTGGCTTGTCGTTGTTCTCCCCTCCTGTGAGAGCACTGGTTCCCTTGCTTTACACTGTCCGCAGGATCTTTGTTATCCTCGATTGGATGCAGGACGTGTGGTTCAACAAGACCTTGCCCGCCAATCCGCCTATCAAGGATGTTGCATGGTTTTGGTTTGGGAGGGGTCTATCGGTTGCAAATTTAGCGTACTTCTCCATCAACCTCTTTGGCTTTTTGATCCCGCGTTTCCTCCCAAGAGCATTCGAGAGATACTTCAGCGAAAGAGACGAGAGTCACATGAAATTTGCGGAAGATAAGCGCTCTGCTGCTGCTAACACATCTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_496394.p1 GENE.S_Transcript_496394~~S_Transcript_496394.p1 ORF type:3prime_partial len:272 (+),score=16.12 S_Transcript_496394:178-990(+)
MSGVSLAVAPRSEPDKATMPASNLEAKPFQSKHQQQTSTTTTGIMGSLRVIELQLVAFIMVFSVSGLVPLLDLVFPAFASAYIIALSRFAFPAHNNIRSSSPELFQGSRLFRLYVILGTSVGLFLPLAYVLGGFARGDDHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALVPLLYTVRRIFVILDWMQDVWFNKTLPANPPIKDVAWFWFGRGLSVANLAYFSINLFGFLIPRFLPRAFERYFSERDESHMKFAEDKRSAAANTSQ

Click here to download the sequence:
Link to NCBI Protein BLAST