Transcript Information: S_Transcript_496577.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9431715187592
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_496577.p1 GENE.S_Transcript_496577~~S_Transcript_496577.p1 ORF type:complete len:315 (+),score=6.17,Collagen|PF01391.14|6.9e+03,Collagen|PF01391.14|1e-06,Collagen|PF01391.14|7.3e-07,Collagen|PF01391.14|3.7e+03 S_Transcript_496577:99-1043(+)
ATGTCTTCCATCGTCAACAAGGTCAAGGACGCTCTCCACCCCGACAAGAAGCACGAGCAGCCCGAGGGAACCTCCGGACCCCACAACTCTCGCGCTGCCAACGCCGCCGACCCCAGAGTCGACTCCGACCGTGACGACCGCGCCAACCCTGCCGGCACCTCCGCCGGTGCCACCAACACTCACACCTCCGGTCTGACCGGTACCCACGGTACCACTGGCTCCTCCGGTCTGACCGGTACTCACGGCACTACCGGCACTTCTGGCCTCACTGGTACTCACGGTACCACTGGCACCCACGGCACTTCCGGTTTGACCGGCTCTAACGCTACCACCGGTTACGATGACCCCGCTGGCACTCACGGCCCTCACGGCGACCGTGTTGCCAACCATGTTGACCCTCGCGTTGACTCTGACCGCGATCACCGTGGTGCTCCTGGCTCCGGCCTTACTGGCAGCCACGGCACCACCGGTACTCACGGCTCTTCCGGCCTGACAGGCAGCCACGGCACCACTGGTACCCACGGCTCTTCCGGCCTGACCGGTAGCCACGGCACCACTGGCACCCACGGCTCTTCCGGCCTGACTGGTGGCACTTCCACCACCCACTCGGCCGTTGGCCACGGTGGTGCTGCCGTTGGCGGTACTCACGGCACCGGCCCCGCCCCCAACACCGCCGGTCCCCACAAGTCGGATGCTCTGAACAAGGCCGATCCCCGTGTGGACTCCGACCTTGACGGCAGCAAGACCGTTGGCGGTAACAAGACCTACGCCCAGTCAAACACCACTTCGGGTGTTGCAAAGGACCCTACCGACGCCGCTCAGGTTCCTCCGTCTGTTTTGGCAGAGCACGTCGGTGAGCCCGTGATCGCACACGACGACCACGGCCACAACCGCGAGAGGCGTAACAGCAAGGTGTCTGCTCAAGAGCTGCACCGTGGACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_496577.p1 GENE.S_Transcript_496577~~S_Transcript_496577.p1 ORF type:complete len:315 (+),score=6.17,Collagen|PF01391.14|6.9e+03,Collagen|PF01391.14|1e-06,Collagen|PF01391.14|7.3e-07,Collagen|PF01391.14|3.7e+03 S_Transcript_496577:99-1043(+)
MSSIVNKVKDALHPDKKHEQPEGTSGPHNSRAANAADPRVDSDRDDRANPAGTSAGATNTHTSGLTGTHGTTGSSGLTGTHGTTGTSGLTGTHGTTGTHGTSGLTGSNATTGYDDPAGTHGPHGDRVANHVDPRVDSDRDHRGAPGSGLTGSHGTTGTHGSSGLTGSHGTTGTHGSSGLTGSHGTTGTHGSSGLTGGTSTTHSAVGHGGAAVGGTHGTGPAPNTAGPHKSDALNKADPRVDSDLDGSKTVGGNKTYAQSNTTSGVAKDPTDAAQVPPSVLAEHVGEPVIAHDDHGHNRERRNSKVSAQELHRGL*

Click here to download the sequence:
Link to NCBI Protein BLAST