Transcript Information: S_Transcript_496781.p1


Annotated TAIR IDAT5G01010.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1388-4924 | Reverse length=479
E-Value9.2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20791407214985
Replicate 20.51709663025425
Replicate 30.43225162695939
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 20.17478006749786
Replicate 30.49959017824175
Condition 3: 24 Hour
Replicate 10.85331576135134
Replicate 20.17706102794021
Replicate 30.19704722191497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_496781.p1 GENE.S_Transcript_496781~~S_Transcript_496781.p1 ORF type:5prime_partial len:128 (-),score=1.64 S_Transcript_496781:7-390(-)
TACAAAGGTGGTCCATATCGATGTCTCTGCTCTTCCATAGGCCCATCGTCATCATTTATCTGTTTGATAAAGTCCAGCAGAACCTACATTATACACAACCAGAGTAATACAATTATTCTGACAAAGCACCAAACAGATTTGCAAAACAACAGAGTCAATATTTATAAACCAAAGGGACAGTTCAACAGTGAGGCTGCACATAGGCTAATTATTGCACAAGTTGGTTCACTCTTTCTGAAAGCAACGTCAAACTCAATACTCAAAAAGCACATTGAGAAAATAATTATTGCCTTTTCTAGTAGCAGAGTCTGCGAACTAGTACTCCCTCCTATTCTAAATAAACTTCTCCTTTCCTTTTTTATGGTCAAACTTCTTAAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_496781.p1 GENE.S_Transcript_496781~~S_Transcript_496781.p1 ORF type:5prime_partial len:128 (-),score=1.64 S_Transcript_496781:7-390(-)
YKGGPYRCLCSSIGPSSSFICLIKSSRTYIIHNQSNTIILTKHQTDLQNNRVNIYKPKGQFNSEAAHRLIIAQVGSLFLKATSNSILKKHIEKIIIAFSSSRVCELVLPPILNKLLLSFFMVKLLKF*

Click here to download the sequence:
Link to NCBI Protein BLAST