Transcript Information: S_Transcript_49703.p1


Annotated TAIR IDAT5G05360.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1588356-1589178 | Forward length=163
E-Value7.2E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.955057238542
Replicate 212.988577723376
Replicate 317.104150400113
Condition 2: 8 Hour
Replicate 111.866547837759
Replicate 29.2013248437585
Replicate 314.439767732407
Condition 3: 24 Hour
Replicate 116.383662617946
Replicate 213.70795055021
Replicate 310.373582779524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49703.p1 GENE.S_Transcript_49703~~S_Transcript_49703.p1 ORF type:complete len:124 (+),score=25.91 S_Transcript_49703:107-478(+)
ATGCAAAACGGGGTAGGAAGTAGTAACAATGGAATTGGAATAGGAAGAACACCAATAACAACGAGAGCAGCAGCAGCAGGCAGCAGTGAAGGAGCAGGAAGGCAACCCTTATCAGAAGTGGTGGCAGATTGTGTAAGAAGGTGGTTTCAAGACACCCTTAAGGAAGCCAAATCTGGTGATGTCAACATGCAAGTCCTTGTTAGTCAAATGTATCATTCTGGTTATGGTGTTCCTAAAGATCCCAACAAGGGAAGGCAATGGATGACAAGGGCTTCAAGAATACGGTCATCAGCTTGGATAGTTAGTGAGAAGCATCCGGGTTACAATGCAAGTGATTCTGATTCGGATGAATTGATTGGCGAAGCACACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49703.p1 GENE.S_Transcript_49703~~S_Transcript_49703.p1 ORF type:complete len:124 (+),score=25.91 S_Transcript_49703:107-478(+)
MQNGVGSSNNGIGIGRTPITTRAAAAGSSEGAGRQPLSEVVADCVRRWFQDTLKEAKSGDVNMQVLVSQMYHSGYGVPKDPNKGRQWMTRASRIRSSAWIVSEKHPGYNASDSDSDELIGEAH*

Click here to download the sequence:
Link to NCBI Protein BLAST