Transcript Information: S_Transcript_49705.p1


Annotated TAIR IDAT5G05360.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1588356-1589178 | Forward length=163
E-Value6.9E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.21705010739
Replicate 212.398923057116
Replicate 311.736286598655
Condition 2: 8 Hour
Replicate 15.4635297506704
Replicate 24.2525001546588
Replicate 35.1087568640038
Condition 3: 24 Hour
Replicate 113.540217039624
Replicate 215.733555143911
Replicate 312.715245526546


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49705.p1 GENE.S_Transcript_49705~~S_Transcript_49705.p1 ORF type:complete len:121 (+),score=20.28 S_Transcript_49705:237-599(+)
ATGCAAAACGGGGTAGGAGCTAGTACCAATGGAATTGGAATAGGAAGAACAACAACAAGAACAGCAGCAGGCAGCGGTGAAGGAATAGGAAGGCAACCCTTATCAGAAGTGGTGGCAGATTGTGTAAGAAGGTGGTTTCAAGACACCCTTAAGGAAGCCAAATCTGGTGATGTCAACATGCAAGTCCTTGTTAGTCAAATGTATCATTCTGGTTATGGTGTTCCTAAAGATCCCAACAAGGGAAGGCAATGGATGACAAGGGCTTCAAGAATACGGTCATCAGCTTGGATAGTGTGTGAGAAGCATCCGGGTTATAACGCAAGTGATTCTGATTCGGATGAATTGATTGGCGAAGCACACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49705.p1 GENE.S_Transcript_49705~~S_Transcript_49705.p1 ORF type:complete len:121 (+),score=20.28 S_Transcript_49705:237-599(+)
MQNGVGASTNGIGIGRTTTRTAAGSGEGIGRQPLSEVVADCVRRWFQDTLKEAKSGDVNMQVLVSQMYHSGYGVPKDPNKGRQWMTRASRIRSSAWIVCEKHPGYNASDSDSDELIGEAH*

Click here to download the sequence:
Link to NCBI Protein BLAST