Transcript Information: S_Transcript_49706.p1


Annotated TAIR IDAT5G05360.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1588356-1589178 | Forward length=163
E-Value2.3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57854350511262
Replicate 20
Replicate 31.0023226132392
Condition 2: 8 Hour
Replicate 10
Replicate 20.97268907129246
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.3707632828867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49706.p1 GENE.S_Transcript_49706~~S_Transcript_49706.p1 ORF type:complete len:92 (+),score=15.09 S_Transcript_49706:237-512(+)
ATGCAAAACGGGGTAGGAGCTAGTACCAATGGAATTGGAATAGGAAGAACAACAACAAGAACAGCAGCAGGCAGCGGTGAAGGAATAGGAAGGCAACCCTTATCAGAAGTGGTGGCAGATTGTGTAAGAAGGTGGTTTCAAGACACCCTTAAGGAAGCCAAATCTGGTGATGTCAACATGCAAGTCCTTGTTAGTCAAATGTATCATTCTGGTTATGGTGTTCCTAAAGATCCCAACAAGGTTATAACGCAAGTGATTCTGATTCGGATGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49706.p1 GENE.S_Transcript_49706~~S_Transcript_49706.p1 ORF type:complete len:92 (+),score=15.09 S_Transcript_49706:237-512(+)
MQNGVGASTNGIGIGRTTTRTAAGSGEGIGRQPLSEVVADCVRRWFQDTLKEAKSGDVNMQVLVSQMYHSGYGVPKDPNKVITQVILIRMN*

Click here to download the sequence:
Link to NCBI Protein BLAST