Transcript Information: S_Transcript_49776.p1


Annotated TAIR IDAT5G62270.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25012227-25014486 | Forward length=420
E-Value4E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.54854747575
Replicate 247.954658294433
Replicate 338.511278102945
Condition 2: 8 Hour
Replicate 147.879319858026
Replicate 246.469349516126
Replicate 348.914878939255
Condition 3: 24 Hour
Replicate 139.356897528508
Replicate 237.398410838105
Replicate 340.716578571344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49776.p1 GENE.S_Transcript_49776~~S_Transcript_49776.p1 ORF type:complete len:363 (+),score=67.02,MRP-L20|PF12824.3|2e-07,Bot1p|PF12298.4|4.8e+03,Bot1p|PF12298.4|5.8e-07 S_Transcript_49776:252-1340(+)
ATGCAATTTCTGAATCGCATAATCTCTCGAAACCCTTCTCTAATAACATCCCTATCCAAGCATTTCCGCGACACCTCATTTTCCCCCAATTTCAACCTCTTCAAAAATTCTAGGGTTTTCTCCACCGACGGCCCAAACAATGGAGACAATGAACAATGGAGCAGTATTACCGACGATAAAAACAGCAGCTTCGATTGGAACAACACGGAATCATCATCCTGGTCAACAGGCCTAACAAAGGACCATTTCGATGGCGAAGCCGTAGGTCATCAAGTCTCAGAATCATCTCAACCAGTCACTGCGAAGAAGAAACAACAACAGGATGAATCGGACAATAACGACATTTTTACCAAGGAGATGAGGCTGGAGTACCAAAGGAGCAAGGATTATGTTAATAGTTTCGACGAAAGGTTGAAAGAGACTGCGTTTTTATTGAAGCAAGTGAGAGAGCCAGGTGCTCGAGGCTCGTACTTGAAGGACTCCGAAAAGGCCGAGATGTATCGGTTGCATAAGGAGAATCCTGAGGTTTATACTGTGGAGAAGTTGGCCAAGGATTTTAGGGTTATGAGACAAAGAGTACATGCTATTCTTTGGTTGAAACAGCTTGAGGAGGAAGAGGAGAAGAAATTAGGGCATCCGCTTGATGATTCCGTTGAGCTTTTGCTCGATACGTGCCCTGAATTCTTTAATTCACATGACAGAGAGTTCCATGTGGCATCACTTCCTTACAAACCTGATTTTAAAGTCATGCCCGAGGGTTGGGATGGCACCACTAGAGACCCTGATGAAGTACACTATGAGATATCAAAGAAGGAAGATGATATTTTGTATGAAGAATTCCTTCAAAGGTTTAACTTCAACAAGAAGAAGTTCGAGGGGGAGGTTAAAGTACACAAATATAGTAGGAGGCGTCCCTCGGATGGATGGAGTTTCACAGTAGAAAAGATGGGGCCTCGGGGTAAGCGTGGAGGTGGTGGTGGATGGAAGTTTGTGAGTCAACCAGATGGATCCACCCGGCCATTGAATGATATGGAGAAGATGTATGTCAAGAGGGAGACTCCTCGCCGCCGTCGAAGAATACTTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49776.p1 GENE.S_Transcript_49776~~S_Transcript_49776.p1 ORF type:complete len:363 (+),score=67.02,MRP-L20|PF12824.3|2e-07,Bot1p|PF12298.4|4.8e+03,Bot1p|PF12298.4|5.8e-07 S_Transcript_49776:252-1340(+)
MQFLNRIISRNPSLITSLSKHFRDTSFSPNFNLFKNSRVFSTDGPNNGDNEQWSSITDDKNSSFDWNNTESSSWSTGLTKDHFDGEAVGHQVSESSQPVTAKKKQQQDESDNNDIFTKEMRLEYQRSKDYVNSFDERLKETAFLLKQVREPGARGSYLKDSEKAEMYRLHKENPEVYTVEKLAKDFRVMRQRVHAILWLKQLEEEEEKKLGHPLDDSVELLLDTCPEFFNSHDREFHVASLPYKPDFKVMPEGWDGTTRDPDEVHYEISKKEDDILYEEFLQRFNFNKKKFEGEVKVHKYSRRRPSDGWSFTVEKMGPRGKRGGGGGWKFVSQPDGSTRPLNDMEKMYVKRETPRRRRRILP*

Click here to download the sequence:
Link to NCBI Protein BLAST