Transcript Information: S_Transcript_49850.p1


Annotated TAIR IDAT2G45920.1
Annotated Gene NameU-box domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18899363-18901097 | Forward length=400
E-Value6.1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.915132952367
Replicate 211.73437581858
Replicate 313.334821432996
Condition 2: 8 Hour
Replicate 136.875154090042
Replicate 230.514543549039
Replicate 331.111733452859
Condition 3: 24 Hour
Replicate 115.955331569111
Replicate 211.387454345959
Replicate 312.703750306989


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49850.p1 GENE.S_Transcript_49850~~S_Transcript_49850.p1 ORF type:complete len:816 (+),score=166.73,Pkinase_Tyr|PF07714.13|8.4e-32,Pkinase|PF00069.21|1.3e-30,U-box|PF04564.11|2.8e-17 S_Transcript_49850:603-3050(+)
ATGGATTTGATAGTACTTGAAGATGATAATCATTGTCATGAGAATGGTGAAAGAACGGCGATGAAAATGGAGACGCTGTATGTGGCAGTGGGGAAGGAAGTGAAAGAGAGTGAATCGGTGATCATGTGGGCAATTCAGAATTCTGGTGGTTGCAGGATTTCTATCATCCATGTTCATCAGCCTGATGAATTCATCCCCATTTTGGGTAAGAAATACCATTGGAGATCCTTGGAAGAGCACCAAGTCAGCGCCTATCGAAGAATTGAGCGACAACTTATGCTTAAAACTCTAGATGAGTATCTTGACATCTGTCACCAGTTTGGGGTGGAGGGTGAGAAGCTCTATACTATTGAAATGGACTCTATTGAGAAGGGCATATTACAGCTTATTTCTGAGCACAACATTGAAAAGTTAGTGATGGGGGCTGCAGCAGATGGCAATTATCACACGAAAATGATGGAACCCAAGTCTAAGAAGGCAGTCTATCTGCGGTCGCATGCACCTGCTTCTTGTCATATCTGGTTTATCTGCAAGGGACATCTCATCCATCAGAGGGATGGTAGTTCACCATTGATAGTGTATGCTGAGAATGAAACATCAACAAATTTAAGATCTGTTTCTCTAATTGGGCAGAGTAACAATTCTCAAGTTTTTAATGGAAATTTGCCATTCTATGAGGGAGATCCCGTTTGTAGAGTGGATAGCAGGAGGGTCACTGAGATTCCCTCCATGGACAGTACTGAATCTACTCCTATTTCGCAGACTCAGTTAGACATAGAAGCTGGTTGCTATGATTGGAGTGAAATTATGAGATGGAGTCGTCTACAAGAGTCAGATGTTCCTGGAATATCATCTTCACAAGTGATTAGAGAGTCAACTACTGATCTATCAGGATTATGTGCAGCAGGACCATTCTCTGAACAGATTCATCATCTTCGTAGTCCTCCAAATACTCTTGAAGATGCTGCAATTGATAAACAAAGTGAGGCGCTTGAACGAGCCATCCTTGAGGTAAAAGCAACAGAAAGCTTATATGTGGAGGAAGTGAGGAAAAAGAATGACCTTATAGAAGAACTTGCAAGTGTGAAGACTGATAGAGACAAGCTCAGGGAAGAACTCCAGGTTGCTATGGCTCAGAATTCAGTGCTCGAAAACAAAGTTGCAAACTATGATCTGGTGGTGAAAGACCTGGAAGAGGGGATTATTTCTAACGTAGAACTTCTGCAAATTTATGAAAAAGAACGAGATGACTTAAAAATGGAGCGTGACAATGTCCTCAAGACAGCTGAAGAATTGGTGAATCAATCTGCAGAGGCAGCATACGAAGCAAATGTGCCTAGGCTCTTCAACTCACTGAGCTTTTCAGAGATCAAAGAAGCAACTAATGATTTTGACCCATTGCTTCAACTATGGCAAGGTGAAAATGGGAGCATCTACAAGGGCGTTATTGCCCATTCACCAGTAACAGTAAGGATGTGGCATCCTGAGGGCCTGCAAGGCCCACAGGAGTTTCATCAAGAGGTTGAAATATTGAGCAGATTTAGACATCCAAACTTGGTCACTCTGATGGGTCTCTGCCCTGAAGCTTGGGCTCTTGTGTACGAGTATGTCCCCAACGGTAGCCTTGAAGATAGAATTAGCTGTAAGGACAACACTCCTCCACTTTCATGGCAAACTCGAATAAGGATCACAGCGGAGTTATGTTGTGCTCTGATCTTTCTTCATTCCCGTATGCCCCAGAGAGTGGTTCATGGTTCTCTGAAGCCCGCCTCTGTTCTTCTTGACTCAAATTTCTCGTGCAAGCTCAGGGACTTTAGATTCTCTCGCATGATCCCATATCACGAAGATTCACTTTCGACTGACTTGTCATATAGTTCAGAATACATGGACCCAGAGTTCATTATGACGGGAGAGGTTAACCCAGCAGTGGATGTTTATTCATTTGGAATGATAGTGCTAGAGCTCCTCACCGGAAAACCAGCATTTGGCATAAGAACTGAACTGGAAGATGCTCTGGATGAACAGACTTTTGATTCTCTCTTGGATGCTTCGGCTGGAGATTGGCCATTTGTGCAAGCTGAGCAATTGGCTCGATTAGCATTGAGGTGTTGTGAGGATAGCACAAGCAATCGACCAGATCTTGAGACAGAGGTATGGCGGGTCCTAGAACCAATGAGGGCTTCGTGTGGGCGTTCACCATCATTAAATTATGGAGATGAGGAACACGATCAAGCGCCATCCTACTTCCTTTGTCCCATTTTTCAGGAAGTGATGAAAGATCCACACGTAGCAGCAGATGGGTATACATACGAGGCAGAGGCGTTGAGAGGTTGGCTTGATGGTGGGCATGATACTTCCCCTATGACAAACCTTCAACTTGAACACTTAAATCTTGTCCCCAACCACGCTCTTCGTTCTGCCATTCAGGAGTGGCAGCAACAGCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49850.p1 GENE.S_Transcript_49850~~S_Transcript_49850.p1 ORF type:complete len:816 (+),score=166.73,Pkinase_Tyr|PF07714.13|8.4e-32,Pkinase|PF00069.21|1.3e-30,U-box|PF04564.11|2.8e-17 S_Transcript_49850:603-3050(+)
MDLIVLEDDNHCHENGERTAMKMETLYVAVGKEVKESESVIMWAIQNSGGCRISIIHVHQPDEFIPILGKKYHWRSLEEHQVSAYRRIERQLMLKTLDEYLDICHQFGVEGEKLYTIEMDSIEKGILQLISEHNIEKLVMGAAADGNYHTKMMEPKSKKAVYLRSHAPASCHIWFICKGHLIHQRDGSSPLIVYAENETSTNLRSVSLIGQSNNSQVFNGNLPFYEGDPVCRVDSRRVTEIPSMDSTESTPISQTQLDIEAGCYDWSEIMRWSRLQESDVPGISSSQVIRESTTDLSGLCAAGPFSEQIHHLRSPPNTLEDAAIDKQSEALERAILEVKATESLYVEEVRKKNDLIEELASVKTDRDKLREELQVAMAQNSVLENKVANYDLVVKDLEEGIISNVELLQIYEKERDDLKMERDNVLKTAEELVNQSAEAAYEANVPRLFNSLSFSEIKEATNDFDPLLQLWQGENGSIYKGVIAHSPVTVRMWHPEGLQGPQEFHQEVEILSRFRHPNLVTLMGLCPEAWALVYEYVPNGSLEDRISCKDNTPPLSWQTRIRITAELCCALIFLHSRMPQRVVHGSLKPASVLLDSNFSCKLRDFRFSRMIPYHEDSLSTDLSYSSEYMDPEFIMTGEVNPAVDVYSFGMIVLELLTGKPAFGIRTELEDALDEQTFDSLLDASAGDWPFVQAEQLARLALRCCEDSTSNRPDLETEVWRVLEPMRASCGRSPSLNYGDEEHDQAPSYFLCPIFQEVMKDPHVAADGYTYEAEALRGWLDGGHDTSPMTNLQLEHLNLVPNHALRSAIQEWQQQH*

Click here to download the sequence:
Link to NCBI Protein BLAST