Transcript Information: S_Transcript_498798.p2


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.57981711276129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_498798.p2 GENE.S_Transcript_498798~~S_Transcript_498798.p2 ORF type:internal len:87 (+),score=18.12,HMG_box|PF00505.15|9.8e-15,HMG_box_2|PF09011.6|6.6e-08 S_Transcript_498798:3-260(+)
GCGTTTATGTATTTTTGTATGGATAAAAGAAAAGAAATTTCCTTGAAAAATCCATCGATAAGAATGGTCGATATGGCCAAAGAGTTGTCAAGGATGTGGAGTGAATTAAAAGACAAGACGCCGTTTGAAAGTATGGCCGAAATGGATAGAGAAAGATATGAGAGAGAAAAGAGGGAATGGTTGTCATCGAAACTGTCAAATGAAGGGAAATCGTCTTCAGAGTCGTTGGGAAAAGAAAGCAGTGATGGGAAAGAGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_498798.p2 GENE.S_Transcript_498798~~S_Transcript_498798.p2 ORF type:internal len:87 (+),score=18.12,HMG_box|PF00505.15|9.8e-15,HMG_box_2|PF09011.6|6.6e-08 S_Transcript_498798:3-260(+)
AFMYFCMDKRKEISLKNPSIRMVDMAKELSRMWSELKDKTPFESMAEMDRERYEREKREWLSSKLSNEGKSSSESLGKESSDGKEE

Click here to download the sequence:
Link to NCBI Protein BLAST