Transcript Information: S_Transcript_4990.p1


Annotated TAIR IDAT3G15010.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5052844-5054058 | Forward length=404
E-Value7.3E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.526852503366
Replicate 236.527191010159
Replicate 337.918571491386
Condition 2: 8 Hour
Replicate 144.022330633916
Replicate 243.119185448768
Replicate 347.230965232614
Condition 3: 24 Hour
Replicate 137.435422745292
Replicate 235.641429823384
Replicate 333.80381885001


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4990.p1 GENE.S_Transcript_4990~~S_Transcript_4990.p1 ORF type:complete len:482 (+),score=106.00,RRM_1|PF00076.18|1.7e-15,RRM_1|PF00076.18|3.6e-10,RRM_6|PF14259.2|5.1e-12,RRM_6|PF14259.2|6.1e-09,RRM_7|PF16367.1|0.24,RRM_7|PF16367.1|0.0065 S_Transcript_4990:119-1447(+)
ATGGATCCCACAAAAAAGCGAAAGCTAGACGAAAACGGCATAAACGATCCAGACCCATCCCTAATGCTCAACCAGAACGATGCCCGCAAGATCCTGGAACCCTTCACACAGGACCAGCTCCTCGAAATCCTCCAAAACGCCGTCGTTTCCCACCCTGACGTCCTCGAATCCGTCCGATCCATCGCCGACCGTGACGTCACCCAACGCAAGCTCTTCATCCGAGGTCTCGGCTGGGAGACCACCTCTGATAGCCTCCGGTCCCTCTTCGCCTCTTTCGGGGAGCTCGAGGAGGCTGTCGTGATCCTCGACAAGACGACGGGGAAGTCGAAGGGGTACGGGTTTGTAACCTACAAGCATATTGATGGGGCTATTTTGGCGTTGAAGGAGCCCAGTAAGAAGATTGATGGGCGGGTGGCGGTGGCCCAGCTGGCGTCTGCTGGGCTGTCGGGTGGGCCGGGTGCTGGTGGTGGGAATGCTGGTGGCCCCGGTGGCAATACTGTGGATGTGTCATTGAGGAAGATTTATGTGGGGAATGTGCCCCATGAGATGCCTGCTGAGAGGTTGTTGTCGTTGTTTTCGAGTTTTGGGGAGATTGAGGAGGGGCCGCTGGGGTTTGATAAGCAGACGGGGAAGTCGAAGGGATTTGCTTTGTTTGTTTATAAGACGCCTGAGGCTGCTCAGGCGTCGTTGGTGGAGCCGGTTAAGAATGTGGATGGGAGGCAGTTGGTGTGTAAGTTGGCTAGTGAGGGTAAGAAAGGGAAGCCTGTGGGACCGGGTCAGGGTGTTGGGAGTGACGGGATGGGAATGGGGATGCAGCCGCCACCCCAGCCGGTTGGTGGGCCTGGTGGGCCATATGGTAGTGGTGGTGGATACTCTTCATATGGTGGATATTCGAGTGGGCCTGGGGGAATGGGTGGGCCGAGTCCAATGAATTCGGGGTATTCTTCCACGGCACAGGGGCATGGTGGGTATGGTGGGAATGCAGGGTATGGGAGTGGAGGAGGATATGGTGGTGGTAGTGGTGGGGTTTCAGGTTATGGTGGGCCGAATACCGGTGGTGGGTATGGTGGGTATGGCAGTGCAGGTGCCGGGTTAGGAGGGGGTGCTGGTGGTGGGGGTATGGGTATGGGTGGCGGAGCAGGTCGTGGTGGATATGGGATGCCACCGAGCTCTGGGGGGATGCCTGGTGGTGGAGGGTATGCTGATGGAGGAGGGCATTATGGAGGGTATCCTAGTCAGCAACATCAGCCTACAGGGACTTCACCTGCCCCTAGAGTTCCTCCTGGGGGTGCTGGTGGGTACCCCAATGCACCACCGCCCTACTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4990.p1 GENE.S_Transcript_4990~~S_Transcript_4990.p1 ORF type:complete len:482 (+),score=106.00,RRM_1|PF00076.18|1.7e-15,RRM_1|PF00076.18|3.6e-10,RRM_6|PF14259.2|5.1e-12,RRM_6|PF14259.2|6.1e-09,RRM_7|PF16367.1|0.24,RRM_7|PF16367.1|0.0065 S_Transcript_4990:119-1447(+)
MDPTKKRKLDENGINDPDPSLMLNQNDARKILEPFTQDQLLEILQNAVVSHPDVLESVRSIADRDVTQRKLFIRGLGWETTSDSLRSLFASFGELEEAVVILDKTTGKSKGYGFVTYKHIDGAILALKEPSKKIDGRVAVAQLASAGLSGGPGAGGGNAGGPGGNTVDVSLRKIYVGNVPHEMPAERLLSLFSSFGEIEEGPLGFDKQTGKSKGFALFVYKTPEAAQASLVEPVKNVDGRQLVCKLASEGKKGKPVGPGQGVGSDGMGMGMQPPPQPVGGPGGPYGSGGGYSSYGGYSSGPGGMGGPSPMNSGYSSTAQGHGGYGGNAGYGSGGGYGGGSGGVSGYGGPNTGGGYGGYGSAGAGLGGGAGGGGMGMGGGAGRGGYGMPPSSGGMPGGGGYADGGGHYGGYPSQQHQPTGTSPAPRVPPGGAGGYPNAPPPYY*

Click here to download the sequence:
Link to NCBI Protein BLAST