Transcript Information: S_Transcript_49927.p1


Annotated TAIR IDAT2G47850.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19595953-19598119 | Forward length=468
E-Value4.2E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8901189470969
Replicate 26.514228813318
Replicate 36.0813332344631
Condition 2: 8 Hour
Replicate 17.5374224396763
Replicate 28.7751647681686
Replicate 38.6825327528911
Condition 3: 24 Hour
Replicate 15.50830036293
Replicate 27.9127962831213
Replicate 38.5341831284552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49927.p1 GENE.S_Transcript_49927~~S_Transcript_49927.p1 ORF type:complete len:464 (+),score=45.96,zf-CCCH|PF00642.20|2.2e-09,zf-CCCH|PF00642.20|1.7e-10,zf-CCCH|PF00642.20|3.1e-09,zf-CCCH|PF00642.20|1.2e-09,zf-CCCH|PF00642.20|1.9e-10 S_Transcript_49927:415-1806(+)
ATGGAGATGTACGGACGGAATTCGGGTAGAGAAGGGTCCGAACCCGATCCACCCTCTGACTGGCCCGTCGACACTGGCCTCGAAGAGTCCATGTGGAGGCTGGGCTTGGCGGGCCGGGAGACGTACCCGGAGAGGCCCGGGGTGTCGGATTGTATGTATTATATGAGGACTGGCTTCTGTGGCTTTGGTTCCCGCTGTCGGTACAACCATCCTCGTGATCGTGCTGCCGCTGTAGCAGCTGCAAGGTTGGCCGGAGGGGAGTACCCAGAACGTCCAGGAGAACCTGTATGTCAGTATTATTTAAAGACTGGAACTTGTAAATTTGGTTCTACTTGCAAGTTTCACCATCCGAGAAATGCTGGTGGATCATTGACCAATGCGCCACTAAATTATCACGGTTACCCATTACGACCGGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGGATAACTTGTAAATTCCATCATCCTCAACCAGCTGGCGTGTCGATGCCAGCAGCTGCGCCTCCATTTTATCCGACGGTGCAGTCTCCTTCTGTTCCTATTCCTGACCAAGCAGGGTCTTCCACCAACTATAGGGTGGCGAGGCCTCCTCTTGTACCTGGTTCTTATGTTCCTGGGAGTTATGGTCCTGTCCTTCTTTCTCCTGGAGTTGTTCCCATGCCAGGCTGGAGTTCATATTCTGGACCTGTAAGTCCTGTAATATCTCCGGGGGCTCAACCTGCTGGAGCAGGTTATGGAGTAAGTTCACTCTCCCCTTCTACACCTGGTCTAGCAGGGTCTTATCCCCATGTACCATCTTCTGCCCTGCAGTCAAGCTCTATTACCAAAGAACATAAGTTTCCAGAGAGACCAGGTGAACCTGAATGTCAATACTATATGAAAACAGGGAATTGTAAGTTTGGCTCCTCTTGTAGATATCATCATCCAGCGGACCGGGCTGCTTCAGCTGCATGTTTCCTTGGCCCACTAGGTCTGCCCCTTCGTCCGGGAACGCAACCTTGCACCTTCTATATGCAAAATGGGTATTGCAAATTTGGGCCCACATGTAAGTTCGACCATCCAGTGAGCATGATGAAATATAGTCCATCAGCTTCTTCTCTGACCGAGATGCCCATTGCTCCTTACTTTGCTGGGTCGTCAGTAGCTACTTTGCCCCCCTCATCTTCCTCTACGGAGCTTCGAACTGAATACGTGTTAGGGACACAAAGGGATGCCCAATCAAATAGAACACTGTCGTCTGGTAACACTTCTGTTGGTTTGACTTTCACACAAACAACTCCCATTAATGGTCAACGGTCTGGTCAAGGTTCTACATTATTAAGCAGTAGCAGAAGCACGGGAGGAGATGATGAAGTTCATCACTCAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49927.p1 GENE.S_Transcript_49927~~S_Transcript_49927.p1 ORF type:complete len:464 (+),score=45.96,zf-CCCH|PF00642.20|2.2e-09,zf-CCCH|PF00642.20|1.7e-10,zf-CCCH|PF00642.20|3.1e-09,zf-CCCH|PF00642.20|1.2e-09,zf-CCCH|PF00642.20|1.9e-10 S_Transcript_49927:415-1806(+)
MEMYGRNSGREGSEPDPPSDWPVDTGLEESMWRLGLAGRETYPERPGVSDCMYYMRTGFCGFGSRCRYNHPRDRAAAVAAARLAGGEYPERPGEPVCQYYLKTGTCKFGSTCKFHHPRNAGGSLTNAPLNYHGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGVSMPAAAPPFYPTVQSPSVPIPDQAGSSTNYRVARPPLVPGSYVPGSYGPVLLSPGVVPMPGWSSYSGPVSPVISPGAQPAGAGYGVSSLSPSTPGLAGSYPHVPSSALQSSSITKEHKFPERPGEPECQYYMKTGNCKFGSSCRYHHPADRAASAACFLGPLGLPLRPGTQPCTFYMQNGYCKFGPTCKFDHPVSMMKYSPSASSLTEMPIAPYFAGSSVATLPPSSSSTELRTEYVLGTQRDAQSNRTLSSGNTSVGLTFTQTTPINGQRSGQGSTLLSSSRSTGGDDEVHHSN*

Click here to download the sequence:
Link to NCBI Protein BLAST