Transcript Information: S_Transcript_49942.p1


Annotated TAIR IDAT5G58300.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23572821-23574871 | Forward length=654
E-Value2E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.16344261915
Replicate 219.619017235232
Replicate 317.522037870379
Condition 2: 8 Hour
Replicate 123.654216092795
Replicate 223.209484158219
Replicate 325.871652787325
Condition 3: 24 Hour
Replicate 118.368786585695
Replicate 223.583092545123
Replicate 323.057906429638


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49942.p1 GENE.S_Transcript_49942~~S_Transcript_49942.p1 ORF type:complete len:641 (+),score=127.71,Pkinase_Tyr|PF07714.13|7.6e-36,Pkinase|PF00069.21|5e-34,LRR_8|PF13855.2|8.5e-05,LRR_8|PF13855.2|0.00078,LRR_8|PF13855.2|0.062,LRRNT_2|PF08263.8|6.9e-08,LRR_4|PF12799.3|0.052,LRR_4|PF12799.3|0.00063,LRR_4|PF12799.3|6.9 S_Transcript_49942:646-2568(+)
ATGATGACAAAGCTTCAACCCTCCTCACCAGAGATATTCTTCATTCTTCTCCTAGTTGCTACCCTGCCCCTCATTTATGCTGACCTAAATTCTGACAGACAAGCTCTTCTCGACTTTGCTGCTAAAGTTCCGCATGGACGACAACTCAACTGGAATACTGCTCCTACTATCTGCACTTCATGGGACGGTATCACTTGCAATCATGAAAGAACCCGAGTAGTTGCTGTCCGTCTTCCTGGGATTGGGCTTTTGGGCCCAATACCATCTGGTACCATCGGAAAACTTGATGCTCTTCAAGTCCTAAGCCTCCGAGCAAATAACCTCAATGGGAACGTTCCTACTGATGTTTTGTCCTTACCGTCTCTCCATTACTTGTTTCTCCAACGAAATAATTTGTCAGGTAGCATTCCTGAAGCTCTTTCTCCTGGACTCATTTTTTTGGATTTGAGCTCCAACTCCTTGACTGGAAAAATTCCACCTACTATTAACAATTTGACAAGGCTTACTGTGTTGAATCTCCAAGACAATAAACTCTCTGGATCCATCCATAATCTTAACCCTCCGAGACTCAAGCTTCTTGATTTGAGCAATAACAAGTTAAATGGGGCTATCCCTAATGCACTTCAGAAGTTCCCTAAGTCATCATTTGAGGGGAACTCTTTATGTGGGCCACCTATAGGCAATTGCTCTGTGAATGCCCCCTCACCTGCTCCTTCTACACCTTCATTGCTGCTTCCACCAGCAGCCTCCATGGAAAGCAAAAATGGCAGTGGGAGGAAGTTCAGTACTGGTGCTATAATAGCTGTTGCAATTGGCGGTTCTGCTGTGCTTGCCCTCCTTGTAATGGTAATCTTGCTATGCTGTTTGAAGAGAAGAAGTACTGAAAGTGCTGTGGCAGATAAAGGAAAGGAACCAGCCAAGAAAGGCAAAAACCAAATGCCAAGTGATGCTTTTGGAAGTGGTGTCCAGACAGCTGAAAAGAACAAATTAGTTTTCTTTGAAGGCTGCTCTTATAACTTTGATCTGGAGGATTTACTTAGGGCTTCGGCTGAAGTTCTTGGAAAAGGGAGCTACGGAACTGCGTACAAAGCCATTTTGGATGAGGGCATAGTTGTAGTGGTGAAACGGTTGAAGGAAGTAGGGATAGGCAAGAAGGAATTCGAGCAGAACATGGAGGTGGTCAGGAAGGTTGGTCGACATCCACATGTTGTGCCTATTCGAGCTTACTACTTCTCCAAGGATGAAAAGCTTCTAGTTTACGACTTTATTCCTGGTGGCAGCTTATCTGCAGTCTTGCATGGTTATGGCTATAATGGAAGAACTCCCCTAGACTGGAACTCCAGAATCACGATTGCACTTGGTGCTGCACGAGGGATACTCCATATCCATTCCGAGGCTGGTGGGAAATTCATCCATGGCAACATCAAATCCTCTAACGTACTCCTCACACAAGATCGTGAGGGTTGCATCTCCGACTTTGGTTTGCCTCTCTTGATGAATTTTCAAGGTATCACCTCAAGAAGCGTCGGATACCATGCCCCAGAAGTGATTGAGGCAAGGAAAGCAAGCCAAAAATCCGATGTCTACAGCTTTGGAGTACTTCTGTTGGAGATCTTGACCGGGAAAGCTCCTCTCAGGTCTAGTCACGGGCACAATGATGTGGTTGATCTTCCGAGATGGGTCCAGTCCGTGGTGAGAGAGGAATGGACATCCGAAGTGTTCGATGCAGAATTGCTTAGGTCTCCAAATGCCGAAGAAGAGATGGTACAGATGCTCCAGATTGCACTCGCTTGCGTCACTAGAGTTCCTGATATGAGACCTAGGATGGAAGAAGTTGTAAGGATGATCGAGGAAATCAGGCCATCCGAGCTATCTGACGAGAACAAGTCCAAGGACTCAAATGCCTGTACACCAACCCCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49942.p1 GENE.S_Transcript_49942~~S_Transcript_49942.p1 ORF type:complete len:641 (+),score=127.71,Pkinase_Tyr|PF07714.13|7.6e-36,Pkinase|PF00069.21|5e-34,LRR_8|PF13855.2|8.5e-05,LRR_8|PF13855.2|0.00078,LRR_8|PF13855.2|0.062,LRRNT_2|PF08263.8|6.9e-08,LRR_4|PF12799.3|0.052,LRR_4|PF12799.3|0.00063,LRR_4|PF12799.3|6.9 S_Transcript_49942:646-2568(+)
MMTKLQPSSPEIFFILLLVATLPLIYADLNSDRQALLDFAAKVPHGRQLNWNTAPTICTSWDGITCNHERTRVVAVRLPGIGLLGPIPSGTIGKLDALQVLSLRANNLNGNVPTDVLSLPSLHYLFLQRNNLSGSIPEALSPGLIFLDLSSNSLTGKIPPTINNLTRLTVLNLQDNKLSGSIHNLNPPRLKLLDLSNNKLNGAIPNALQKFPKSSFEGNSLCGPPIGNCSVNAPSPAPSTPSLLLPPAASMESKNGSGRKFSTGAIIAVAIGGSAVLALLVMVILLCCLKRRSTESAVADKGKEPAKKGKNQMPSDAFGSGVQTAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILDEGIVVVVKRLKEVGIGKKEFEQNMEVVRKVGRHPHVVPIRAYYFSKDEKLLVYDFIPGGSLSAVLHGYGYNGRTPLDWNSRITIALGAARGILHIHSEAGGKFIHGNIKSSNVLLTQDREGCISDFGLPLLMNFQGITSRSVGYHAPEVIEARKASQKSDVYSFGVLLLEILTGKAPLRSSHGHNDVVDLPRWVQSVVREEWTSEVFDAELLRSPNAEEEMVQMLQIALACVTRVPDMRPRMEEVVRMIEEIRPSELSDENKSKDSNACTPTP*

Click here to download the sequence:
Link to NCBI Protein BLAST