Transcript Information: S_Transcript_499619.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.437832174215
Replicate 22.0210188907647
Replicate 32.9564691431726
Condition 2: 8 Hour
Replicate 12.6046278249933
Replicate 24.2694367633066
Replicate 34.23062624221
Condition 3: 24 Hour
Replicate 11.3340386864485
Replicate 23.2871177095466
Replicate 34.2357631825386


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_499619.p1 GENE.S_Transcript_499619~~S_Transcript_499619.p1 ORF type:5prime_partial len:131 (-),score=5.81,zf-RVT|PF13966.2|8.7e+03,zf-RVT|PF13966.2|1.5e-16 S_Transcript_499619:6-398(-)
ATTGATGCAAGCTGGGCCTGGAAGACCATCTGTAAGATAAGGGATCTTATAAAGCCAGGATATCAAGGCAATACATGGATAGTCTCCCCCAAAGGAGATTATACCTGTGCTACTGGCTATGATTGGTTACAACAGAAGAAAGAAAGAGTTCATTGGTGTGGTCTTGTGTGGAGTAGATATAACATTGCTAAGCACTCTTTTATAACGTGGATGATTATGCTTGGCAAAGCAAAAACCAGGGATATACTGCACCAACGAGGCATCTGCAGGGACACTTCCTGCCCACTATGTGAGAGTCACAATGAAAATTTAAATCACCTCTTCTTCTCATGCCCATTCAGCACAACCTTACTCCAATTATACTGTAAGGCTTATGGAGTAAGCAGCTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_499619.p1 GENE.S_Transcript_499619~~S_Transcript_499619.p1 ORF type:5prime_partial len:131 (-),score=5.81,zf-RVT|PF13966.2|8.7e+03,zf-RVT|PF13966.2|1.5e-16 S_Transcript_499619:6-398(-)
IDASWAWKTICKIRDLIKPGYQGNTWIVSPKGDYTCATGYDWLQQKKERVHWCGLVWSRYNIAKHSFITWMIMLGKAKTRDILHQRGICRDTSCPLCESHNENLNHLFFSCPFSTTLLQLYCKAYGVSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST