Transcript Information: S_Transcript_49971.p1


Annotated TAIR IDAT4G27430.1
Annotated Gene NameCOP1-interacting protein 7
Annotated Gene Symbol(s)CIP7
Annotation TypeOrtholog
Chromosome Positionchr4:13718817-13722736 | Forward length=1058
E-Value4.8E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.817193060514
Replicate 229.962509603684
Replicate 328.127924001331
Condition 2: 8 Hour
Replicate 127.833906714007
Replicate 226.071881577584
Replicate 331.255974322735
Condition 3: 24 Hour
Replicate 117.710557714881
Replicate 217.601647353838
Replicate 318.470363294113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49971.p1 GENE.S_Transcript_49971~~S_Transcript_49971.p1 ORF type:complete len:1173 (+),score=331.58 S_Transcript_49971:393-3911(+)
ATGGATCCCTCTACTCGTCTCGATTATGTTCTCTTCCAGCTCACTCCTACTAGAACCAGGTGTGATCTGGTGATATTCGCCGGGAAATCGAACGAGAAGTTGGCGTACGGGCTGCTAGAGCCGTTCATTGCGCACTTACGATCAGCTAAAGATCAGATTTCCAAAGGCGGTTATTCCGTCACTCTTAGACCTCCTTCCTCCTCCATCGCTCACTGGTTCACTAAAGCCACTCTTCAGAGGTTTGTGAGATTCTTGAGTACGCCGGAGGTGTTAGAGAGGTTTGTGACGATAGAGAGGGAGATTTCGCAGTTGGAGAATTCCATCAAGTCTTATGAGGCTTCTAATGGCGATTCTGATCTTGGAGCTCAAGGGAATTCCAAACAATCAGGTGCTTCCTTTAAGTCGAAAAGCGAATTCACTGATGGCAGTGATCCTGCCCAGGAGGAAAACTCCAAGGCTCGTCTCCAGCGTGTTGTGGAAACTCGTAAAGCAGTCCTTAGAAAGGAGCAAGCAATGGTATATGCTCGTGCTTTGGCAGCTGGATTTGAAATGGATAATCTGGATGACCTTTTAATGTTTTCTGACACTTTTGGAGCTTCACGCTTGAGAGAAGCATGCATAAACTTCAAGGAGTTATGCAAGAAGAAAAATGAAGATAGGCTTTGGGTGGATGAGATTGCTGCAATGCAGGCTATCGTGCAACCCGACTTGTCGTACTTGGGGACATCTGGAATTATCCTTGCTGGTGAAGATGATCCTGCCCAAAATTTCATGGTGGGTGGGAAGCAGAATGGAAGCACAGACTTGTCACTTTCTGATTCTATGACTAGTCATGGGAGTTCAGATGCAAATCAAGAAAATGGTTCAGCTCAGACACTACCAACAGATGCAAAAGCACAAATGCTAAATCCATGGGCAAACCAATTCCCTCCATATTACCATGCATACCAACAAATGCCCCCCTACCAAGGGTATGTGTTCCCTGGAATGCAGGCTGGCGCACCTTATTATCCTCCAAATATGCAGTGGACTCCGAATGCTGATCGTGAATCACATGATCGCCGTAGTCGCAAATCATCATCCAAGAAGAAAGACAAAGCCTCTAAATTACGGGGATCAGAGAATGAGGAGCTAGATGAATCTACTGAGCCCAGTGGTTCCAGTTCCGAGACTGAGACTGATTCCTCACCAGAGAGGTCTCGAAAGAAAAGGAATGGGAAGAAATCTTCAAGAAAAGTTGTTATACGCAATATAAATTACATTACATCGAAAAACGATGGAGAAAAAAATGGTGATTCTGAGGAGGATTCATCTGATGATGATTATGTGGATGGTGATTCCCTCAAGCAGCAGCTAGAAGACGCAGTTGGCTCCTTTGAAAAACATCAGAAGTCTTCACGCAACCAAAGAAAACGTAATGGCTCTAAGCACCGCAGTTCTGTTAATGGCTCCACTGATCAGGATGGTGAAAATGCATCTCTGAAGAATAATGGAAACAAAGGAAATGAAAACTGGGATGCCTTCCAGCAGCTGTTGCTTAAGGATGAACCTGACAATAATGGTCCTGAGCCACACCCAGTGCAGTTTGAAGAGGAACATTTTGCAACAGCCAAGTCTGTGGAACCAAATCCGTATGCATTAAATCTGGAAGGAGAGGGAAGAGCAAAGCAAAGACCTGTTGCTGCTGATGCTTTTCTTGTCACTGAGATGGGCATAGGTGATGATAGCGGCACAGCTAAAATCTCAGTTGGAAACTTTGATCCCCTTGAGAGTTTACGCCCAGCCATGAAAAAGGGTAGTGCTCCTGAAGAATTCCTGTTTTCACACAGAATTGAAGAACCAGAGAGTTATGCACGGGTGACATTGTCTGATGACACTGCCCGTTCATCTGTAATCAGAAGTCAAAGCGGTGAGGATTGGTTCATCAGCAAGCAATCAAATGAACCTTCAGGGGAAAATAGTCATCTCAGCTTTATTGAAGGAGATTATGTGACAACTCCTGCTAACCAAGCCGAGAAGAAAAAGAAAGATGTTGTTTTTGATGATTCTCTCATGATTCAGGGAATGATAATGAATGACCATCGTGAATCCCAGCTGCAAACTGATATAAGCCTTGTTTCTGATGTTGTCGAGGCTTCCTTTATTGAAAATGGTATGGCAGAAGTGCCACAGAAAAAAGCTGAATCGCATGGGTTCTATGAACCAGTTGATCTTTACATGGTTCGAGACCGTGATACAGTTGTGGAAGAACCAGTGGCTTCTTGGACCCCAGAGATGGATTATGAAAATAATGTTTGTGTTAAAAAAGACTCAGAGGCAGATGCATGTACTGACTCGAACATGAAATCTAATGAAAAGGATCCAAACTACAAAAAGACTGGGGCTTCTGTCACAAAAACCTCACCTAAAGTCGCAACGTCAAGAGTTTTGGGTGGACCTTTAAGGAAAAGTAAACCTGAAACAACAATGGGGAGTAGAAGGTCGACTTTCGGGAGCATAACATCTGTTTCCAGGAACCAAGCTGAGAAGGAAGAAGAGAGAAGAAAGAGAATAGAAGAATCAGCTCTTCAGAGACAAAAAAGAATTGCTGAAAGGAGTGCTTCCAGAGGTGGCAGTCCAGCGACAGCTACAAAGACGCAAACAGGAAACAAAGTAAAGTCAGCTTCCCCTAATGCTCAGAGATCAAAACTTCAATCACCAGCTGAAGAAACGAAGCCGCCAAAGCCCATCCTCAGGACATCCACCATTGAGAGACTTGCAGCTGCAAAAACAAGCCCAAAGGTATCATCTGATCCACCTAAGAAAGAAGTTTCTAAAGTGAACAATGGATCACGAAAGACTGCTGGTGCAGATTTGAAGAAGGTGAAAACGAACAAGATTGGAAGTTCCGAAAAGAAAGCTGAAGATGAAAACGTAGTTGGTGTTAGCCCGTCTATTTCTGAACCTGAGGAGGAAAAGATTACTGACAAAATTGATGCTGTGGTACTATCTTCCGATTTGCCCGTTGTTCAAAGAGTAGACGCTTCTGATGAGGTAGACGATTCCACAGACATTAAAGAGATTGATGTTAAATCTTCTGTCGTCAATAAGGAAGCAAAAGTAGATGTGCAGACAGGTAGCTTTGACGAAAATGTAGGAAACCCTGTTGAAGATCATTCAACAAAGCCAGATTCTGTCGTAGACAGCAGTAATGAGATATCTGAAGCATCCATCCCCTTAGCTGAAGAGGAGAAAATTTCTGAAGATAATGTAAAAGCTCCTCCGGAATTGAGTATCCATCCCGTGCCTGAGTCACCCACCAAACCTGTAGCCTCTCCTTTTATTGTTGATGAGAAGACTGCAACCAATGGGAATGTTCAAAACTTTCCTGAAATTTCTGAAGTGCATGAATCAACTCCCCCACAAAATGAAATGAGCCTAGATCCAATCCAGTCGAGAAAGAAATGGGGCAGTGCTGAAAACTCTCCGAAAGCAGCAAAGGGATTCAGGAAGCTTCTAATGTTTGGTCGAAAGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49971.p1 GENE.S_Transcript_49971~~S_Transcript_49971.p1 ORF type:complete len:1173 (+),score=331.58 S_Transcript_49971:393-3911(+)
MDPSTRLDYVLFQLTPTRTRCDLVIFAGKSNEKLAYGLLEPFIAHLRSAKDQISKGGYSVTLRPPSSSIAHWFTKATLQRFVRFLSTPEVLERFVTIEREISQLENSIKSYEASNGDSDLGAQGNSKQSGASFKSKSEFTDGSDPAQEENSKARLQRVVETRKAVLRKEQAMVYARALAAGFEMDNLDDLLMFSDTFGASRLREACINFKELCKKKNEDRLWVDEIAAMQAIVQPDLSYLGTSGIILAGEDDPAQNFMVGGKQNGSTDLSLSDSMTSHGSSDANQENGSAQTLPTDAKAQMLNPWANQFPPYYHAYQQMPPYQGYVFPGMQAGAPYYPPNMQWTPNADRESHDRRSRKSSSKKKDKASKLRGSENEELDESTEPSGSSSETETDSSPERSRKKRNGKKSSRKVVIRNINYITSKNDGEKNGDSEEDSSDDDYVDGDSLKQQLEDAVGSFEKHQKSSRNQRKRNGSKHRSSVNGSTDQDGENASLKNNGNKGNENWDAFQQLLLKDEPDNNGPEPHPVQFEEEHFATAKSVEPNPYALNLEGEGRAKQRPVAADAFLVTEMGIGDDSGTAKISVGNFDPLESLRPAMKKGSAPEEFLFSHRIEEPESYARVTLSDDTARSSVIRSQSGEDWFISKQSNEPSGENSHLSFIEGDYVTTPANQAEKKKKDVVFDDSLMIQGMIMNDHRESQLQTDISLVSDVVEASFIENGMAEVPQKKAESHGFYEPVDLYMVRDRDTVVEEPVASWTPEMDYENNVCVKKDSEADACTDSNMKSNEKDPNYKKTGASVTKTSPKVATSRVLGGPLRKSKPETTMGSRRSTFGSITSVSRNQAEKEEERRKRIEESALQRQKRIAERSASRGGSPATATKTQTGNKVKSASPNAQRSKLQSPAEETKPPKPILRTSTIERLAAAKTSPKVSSDPPKKEVSKVNNGSRKTAGADLKKVKTNKIGSSEKKAEDENVVGVSPSISEPEEEKITDKIDAVVLSSDLPVVQRVDASDEVDDSTDIKEIDVKSSVVNKEAKVDVQTGSFDENVGNPVEDHSTKPDSVVDSSNEISEASIPLAEEEKISEDNVKAPPELSIHPVPESPTKPVASPFIVDEKTATNGNVQNFPEISEVHESTPPQNEMSLDPIQSRKKWGSAENSPKAAKGFRKLLMFGRKS*

Click here to download the sequence:
Link to NCBI Protein BLAST