Transcript Information: S_Transcript_49989.p1


Annotated TAIR IDAT1G14180.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4847828-4848970 | Forward length=348
E-Value8.4E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.180650293198
Replicate 212.990742269875
Replicate 312.070793203135
Condition 2: 8 Hour
Replicate 121.584823289361
Replicate 221.500925091708
Replicate 318.204045034911
Condition 3: 24 Hour
Replicate 116.37037497592
Replicate 213.785773464932
Replicate 313.50085101977


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_49989.p1 GENE.S_Transcript_49989~~S_Transcript_49989.p1 ORF type:complete len:411 (+),score=79.39,zf-RING_2|PF13639.2|5.5e-06 S_Transcript_49989:858-2090(+)
ATGGGTTCTCAAGAACCATATTGGCGTACTAATACGAGCTTCTCGCCTCCCCCACCAAGATGGGATTATCGCTTCCAATCTGAAGGGATTCAATATGGTTCTAGTGACAGTGTTCAGTTGTTTGGATCTACATCATCAAACAGTAAAGAAAGCAGGAGGTGGATGAGAGGAGGCTCACATCCAACTCATCAGTACTCTACATCTGAGGGTGGTGTCATGTTCTTTAGTAGTCCATCTGATACGTCTCTGATCCAACCATGGACACCTCCACCAATGCAAGGATTCAATGTTGAAGAATATGGGCCTTCTAAGAGAGATCATATGTCAGGGCCGTTATCCTTCACACCCACAATGGAGGGTGCGTCAGTGCTGCCAGACGGTGGGGGATCCACTTCTTCTTGCTCTGATGGTAGTGAGTTTGAGCACTCAGGAAAGCTACACCTTTCAACTCCTCGCAATTTTCCAAGTCGTCGCTCTTTTATGTCCAAGCCAATTCATCCTCTATCCTTCCCAGTCCAAATGCCTACAAGAGAAGCTTCTGCGAGCCCAGCTGCTGGATTTGCAGAGTATGACACCACCACTCCTCAGAGGGACACCCGTCGCTTGAGCAGTGGCAGCAGCAGCATTGATTTGACTGATATTTCTGAGCCATACGAGTCTGATTTTCTTGGCCGAGCATCTAGTTCCAGTGAGGGCTATAAATGCGGGTTATGTGATCGGCTTCTTTCACAGAGATCACCTTGGAGCTCAAGGCGGATTGTTAAAAGCGGAGACATGCCCGTCACTGGGGTTCTTTCCTGCCGGCATGTTTTCCATGCAGAGTGCCTGGAACAGACAACCCCAAAGTCACATAAAAGCGATCCTCCTTGTCCTCTTTGTAATAAGGTGGAAGGCGAAAATTCCCCTGAGCAACGTGCCTTTCCAAGGTTGAGGAATACCTTCCCAAGACTTAGAACGTTTAGTGAGGAGGGCTCATCAAGAACTTGGGGTTGCGTCCAAGCCGGTGATTGTGTTGAAGGAGCTTTGCATACGCCACAGAGAAGCAGTATGTTTCTCCTGAACCGTAACAAAATCCAGAAGAATCTCTCCCTAAAGGGTAACTCCACCAAAGATTTTCCTGGCAAACTGAAGAAAACTGGCTCATATCCCCTTCATCTCTTCGGTGGAAAATTTGCTGATCACAGTGCAGGTGGGTGCTCAAAGAAAACAGCTGGTCCTAGCTCGAAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_49989.p1 GENE.S_Transcript_49989~~S_Transcript_49989.p1 ORF type:complete len:411 (+),score=79.39,zf-RING_2|PF13639.2|5.5e-06 S_Transcript_49989:858-2090(+)
MGSQEPYWRTNTSFSPPPPRWDYRFQSEGIQYGSSDSVQLFGSTSSNSKESRRWMRGGSHPTHQYSTSEGGVMFFSSPSDTSLIQPWTPPPMQGFNVEEYGPSKRDHMSGPLSFTPTMEGASVLPDGGGSTSSCSDGSEFEHSGKLHLSTPRNFPSRRSFMSKPIHPLSFPVQMPTREASASPAAGFAEYDTTTPQRDTRRLSSGSSSIDLTDISEPYESDFLGRASSSSEGYKCGLCDRLLSQRSPWSSRRIVKSGDMPVTGVLSCRHVFHAECLEQTTPKSHKSDPPCPLCNKVEGENSPEQRAFPRLRNTFPRLRTFSEEGSSRTWGCVQAGDCVEGALHTPQRSSMFLLNRNKIQKNLSLKGNSTKDFPGKLKKTGSYPLHLFGGKFADHSAGGCSKKTAGPSSKK*

Click here to download the sequence:
Link to NCBI Protein BLAST