Transcript Information: S_Transcript_499969.p1


Annotated TAIR IDAT5G20885.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7084133-7084663 | Reverse length=176
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37220980748504
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.1564464939841
Replicate 30.29812374272701
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17637793290291


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_499969.p1 GENE.S_Transcript_499969~~S_Transcript_499969.p1 ORF type:internal len:143 (+),score=16.40,zf-RING_2|PF13639.2|1e-13,zf-RING_11|PF17123.1|5.6e-10,zf-RING_11|PF17123.1|1.3e+03,zf-rbx1|PF12678.3|7.4e-09,zf-C3HC4|PF00097.21|4.3e-07,zf-C3HC4_2|PF13923.2|2.5e-06,zf-RING_5|PF14634.2|4.9e-06 S_Transcript_499969:3-428(+)
GTCATCGTCCTAGTCATCATCCTCCACATATACGCTAGGTGTGTCCTCCGCTCACCTCACGGCCGCCTCGCCACCGCCCTCTCCACCCTCAGCCACCGCCATACGCCTCCTTCCGAGGCGCCCAAATCCGGGCTTGACCCGATTGTCATCCAAGCTCTGCCTTCCTTCTTGTACAAGCAATCCAACGGCCAGCAGGAGGATCAGATTGAGTGTTCTGTTTGCTTGAGCTATTTGGAGGAGGGTGAGCTGGCAAGGAAGTTGCCTAATTGTAGCCATGTTTTTCACATGGCTTGCATTGATATGTGGCTCAGTGGCCAGTCCACGTGTCCTGTTTGTCGGTCCGAGGCGGCCCCACGGATGGCCCCACACGAGCGTGAACCGCCAATGAGAAGCCAGCAGCTGGAGGTGGTGGTTCCGGTGGTGGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_499969.p1 GENE.S_Transcript_499969~~S_Transcript_499969.p1 ORF type:internal len:143 (+),score=16.40,zf-RING_2|PF13639.2|1e-13,zf-RING_11|PF17123.1|5.6e-10,zf-RING_11|PF17123.1|1.3e+03,zf-rbx1|PF12678.3|7.4e-09,zf-C3HC4|PF00097.21|4.3e-07,zf-C3HC4_2|PF13923.2|2.5e-06,zf-RING_5|PF14634.2|4.9e-06 S_Transcript_499969:3-428(+)
VIVLVIILHIYARCVLRSPHGRLATALSTLSHRHTPPSEAPKSGLDPIVIQALPSFLYKQSNGQQEDQIECSVCLSYLEEGELARKLPNCSHVFHMACIDMWLSGQSTCPVCRSEAAPRMAPHEREPPMRSQQLEVVVPVVV

Click here to download the sequence:
Link to NCBI Protein BLAST