Transcript Information: S_Transcript_50088.p1


Annotated TAIR IDAT1G77250.1
Annotated Gene NameRING/FYVE/PHD-type zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29020444-29022938 | Reverse length=522
E-Value5.3E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.665973144189
Replicate 210.124704796942
Replicate 310.200348895553
Condition 2: 8 Hour
Replicate 112.378950886144
Replicate 210.994384519866
Replicate 39.8914292824485
Condition 3: 24 Hour
Replicate 19.2765943590194
Replicate 29.8572057198497
Replicate 310.840296482336


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50088.p1 GENE.S_Transcript_50088~~S_Transcript_50088.p1 ORF type:complete len:584 (+),score=113.87,PHD|PF00628.25|1.4e-07,PHD|PF00628.25|1.9e+03,PHD|PF00628.25|0.00014,PHD|PF00628.25|3.5e-13 S_Transcript_50088:299-2050(+)
ATGGGGACTGAGGAGAGATTCAATAACAGCAGCAACAACAACAGTTATAGTAGTAGTGGGTTGTTGAATGGAGGAAGTTCAAGTGCTAGCGGAAGTTCTGAGCTTCGAACCTATAAACGGCGAAGGAAGTTCAATTTGGAGGAGCATTCTTGTAAGCCATCTGCTCAGTTCAACGATAAGGTAGTAAAAGAATTAGTGGACATAGATTTGCAAAAAAATACTTGTGAGCAGGTCTGTGATCCGAAGATAAATTGTCATTCTCTACTAAATGGTTCAGACAATTGCTCTTATCAACATTGGAGAAATATGTTGGAAAATATGTGTCGATCACTGAGTCCTGAAGGTGGAACTGGTGGCATACAGGGTTGCATTAGAGATGCCCTTAATAACACTTGCACTAATACAGACTTGGCAGAGCATCATGATCGTCAGTCCCATTTTCAGAGCACTGGGCTGCTTAATGGATCTTCAATTACTACTAAAGGACTTTCGGCAGTAGCCTCTAATGGATCTTCAAGCGAGTCAGGTCATGCAGCTGTCTCTAGGATTTGTGAACGTGTCTTTTTCAAACTTATCATGTCAGGGAAGTTTGCTTTATTGTGCAAGCTCCTCTCTGAAAATTTTGACGGGCTAAAGATGGAGAAAGTTTTGAACTTCAGTCTTATTAACACTCGGATAAAAGAAGGAGCATATGAGCATACACCTATGCTGTTCTCATCCGATCTACAACAAATATGGAGAAGGCTTCATTCAATTGGTAATCAGATGGTTTCTCTCACAAATAATCTTTCGCAGTTATCAAGGGCTTTTTGCAATGAATTGGGTGGAGTTGCAGAAGTTGAGACCTCAAGTGACAGAAAACATGAGTCACCTGCCCAAGATTCTGATATGCTGACAAAATGGGAAGAACCAGGTGCTTCTGTGTTCTGCACCTGCAGGCAGTGTGGAGAGAAGTCAGATGGTAGAGATTGTTTGGTGTGTGACTCTTGTGAAGAAATGTTCCATGTTTCTTGCATTCATCCCGCTGTTAAGGAAATTCCACACAAAAGTTGGTATTGTGCCAATTGTACTGCTAGTGGTATTGAATCTCTTCATGAAGATTGTGTCGTCTGTGAGAGGTTAAACGCCAATTCTGGAATGAATGGAGGAGCTGATATTACTCAGGCAGAAGAGGAAGCACTCCATGAATTTGAAGAGAGTGCAGATGGTGTCACAGAGGGTGGCCCTCAGTTGTTCAAAGGAAGCAAGCAATTGCCTTGTGAGATATGTGGGCATATGCTGCATAATGGTGAAGAGATCCGTGTCTGTGAACATACTTATTGTCCTAAGTACTATCACACTAGGTGCTTGACAAATAAGCAACTGAAATCATATGGCCCTCGTTGGTATTGCCCTTCTTGTCTATGTAGGGTTTGTCTTACTGATAAGGATGATGAAAAGATCGTAATGTGTGATGGCTGTGATCATGGATACCATATCTATTGCATGAACCCTCCCCGAAACTCAGTTCCTGAGGGCAATTGGTTTTGCTCAAAATGTGACGCAGGAATACAAGCCATATGCAAGGTCAGAAAGTTGTATGAGGGGCTTGAGAGGGATAAGAGAAGTGAGGGGAAAAGAATCACTGAAAGTTCCTTAAAGAAATCAATATTGAATTTTAAACAGGCTGAGGTTGGGTCTGGTGGGATGGATATGCTTTTAACTGCCGCAAGAACACTAAATGAAGAAGACTTGGCTGCCCTAGATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50088.p1 GENE.S_Transcript_50088~~S_Transcript_50088.p1 ORF type:complete len:584 (+),score=113.87,PHD|PF00628.25|1.4e-07,PHD|PF00628.25|1.9e+03,PHD|PF00628.25|0.00014,PHD|PF00628.25|3.5e-13 S_Transcript_50088:299-2050(+)
MGTEERFNNSSNNNSYSSSGLLNGGSSSASGSSELRTYKRRRKFNLEEHSCKPSAQFNDKVVKELVDIDLQKNTCEQVCDPKINCHSLLNGSDNCSYQHWRNMLENMCRSLSPEGGTGGIQGCIRDALNNTCTNTDLAEHHDRQSHFQSTGLLNGSSITTKGLSAVASNGSSSESGHAAVSRICERVFFKLIMSGKFALLCKLLSENFDGLKMEKVLNFSLINTRIKEGAYEHTPMLFSSDLQQIWRRLHSIGNQMVSLTNNLSQLSRAFCNELGGVAEVETSSDRKHESPAQDSDMLTKWEEPGASVFCTCRQCGEKSDGRDCLVCDSCEEMFHVSCIHPAVKEIPHKSWYCANCTASGIESLHEDCVVCERLNANSGMNGGADITQAEEEALHEFEESADGVTEGGPQLFKGSKQLPCEICGHMLHNGEEIRVCEHTYCPKYYHTRCLTNKQLKSYGPRWYCPSCLCRVCLTDKDDEKIVMCDGCDHGYHIYCMNPPRNSVPEGNWFCSKCDAGIQAICKVRKLYEGLERDKRSEGKRITESSLKKSILNFKQAEVGSGGMDMLLTAARTLNEEDLAALDA*

Click here to download the sequence:
Link to NCBI Protein BLAST