Transcript Information: S_Transcript_5016.p1


Annotated TAIR IDAT2G34430.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex II subunit B1
Annotated Gene Symbol(s)LHB1B1, LHCB1.4
Annotation TypeOrtholog
Chromosome Positionchr2:14524818-14525618 | Forward length=266
E-Value1.7E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12289.1769510744
Replicate 22484.916772146
Replicate 32764.3435541859
Condition 2: 8 Hour
Replicate 1615.58680583552
Replicate 2647.81930673139
Replicate 3802.3762807513
Condition 3: 24 Hour
Replicate 12542.4807931596
Replicate 22665.1470147669
Replicate 32586.6728557368


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5016.p1 GENE.S_Transcript_5016~~S_Transcript_5016.p1 ORF type:3prime_partial len:232 (+),score=46.63,Chloroa_b-bind|PF00504.17|2.7e-49 S_Transcript_5016:145-837(+)
ATGGCTGCATCTACAATGGGCCTCTCTTCACCCTGCCTTGCCGGAAAGGCTGTCAAGCTCGGCCCAACCGCCTCCGAAATCCTTGGAGAGGGTTGGATCACCATGAGGAAGGCTGCCGGCAAGGCCAAGCCTGTTTCATCCGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCTGGTGACTACGGTTGGGACACTGCTGGGCTTTCAGCTGACCCTGAAACCTTCGCTAAAAACCGTGAGCTTGAGGTGATCCATTGTAGATGGGCCATGTTGGGTGCTTTGGGCTGTGTTTTCCCCGAGCTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCCGTTTGGTTCAAGGCCGGAGCCCAAATCTTTAGCGAAGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCATGCCCAGAGCATCCTTGCCATCTGGGCTTGCCAGGTTATCTTGATGGGGGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTACTGACCCACTTTACCCTGGTGGTAGTTTTGACCCATTGGGCCTTGCAGAAGATCCAGAGGCCTTCGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGTAGATTGGCTATGTTCTCAATGTTTGGATTCTTTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5016.p1 GENE.S_Transcript_5016~~S_Transcript_5016.p1 ORF type:3prime_partial len:232 (+),score=46.63,Chloroa_b-bind|PF00504.17|2.7e-49 S_Transcript_5016:145-837(+)
MAASTMGLSSPCLAGKAVKLGPTASEILGEGWITMRKAAGKAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV

Click here to download the sequence:
Link to NCBI Protein BLAST