Transcript Information: S_Transcript_5017.p1


Annotated TAIR IDAT2G34430.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex II subunit B1
Annotated Gene Symbol(s)LHB1B1, LHCB1.4
Annotation TypeOrtholog
Chromosome Positionchr2:14524818-14525618 | Forward length=266
E-Value4E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11027.463971738
Replicate 21088.7102273212
Replicate 31239.7876425482
Condition 2: 8 Hour
Replicate 1364.69116858793
Replicate 2384.4748502515
Replicate 3424.15838525355
Condition 3: 24 Hour
Replicate 11184.7853687261
Replicate 21329.132139661
Replicate 31212.5737297548


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5017.p1 GENE.S_Transcript_5017~~S_Transcript_5017.p1 ORF type:complete len:237 (+),score=42.83,Chloroa_b-bind|PF00504.17|1.1e-50 S_Transcript_5017:145-855(+)
ATGGCTGCATCTACAATGGGCCTGTCTTCACCGTCTCTCGCTGGACAGGCTGTCAAGCTCAGCCCAACCGCCTCCGAAATCCTCGGTGAGGGCAGGATCACCATGAGGAAGGCTGCCGGCAAGGCCAAGCCTGTTTCATCCGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCTGGATTGTCAGCAGACCCAGAGACCTTCGCCAAGAACCGTGAGCTGGAGGTGATCCACTGCAGATGGGCCATGTTGGGGGCTTTGGGCTGTGTATTCCCGGAAATCCTCTCGAAGAACGGAGTCAAGTTCGGTGAGGCAGTTTGGTTCAAGGCTGGAGCCCAAATCTTCCAAGAAGGTGGGCTGGACTACCTTGGCAACCCAAACCTGATCCACGCCCAAAGCATCCTGGCCATCTGGGCCTGCCAGGTGGTCCTAATGGGCTTGATCGAGGGCTACAGAGTCGGTGGTGGCCCACTTGGCGAGGGCCTCGACAAGATCTACCCAGGTGGTGCTTTTGACCCACTTGGCTTGGCTGATGACCCTGAGGCCTTTGCTGAGCTTAAGGTTAAGGAGATCAAGAATGGGCGTTTGGCTATGTTCTCAATGTTCGGATTCTTTGTTCAGGCTATTGTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5017.p1 GENE.S_Transcript_5017~~S_Transcript_5017.p1 ORF type:complete len:237 (+),score=42.83,Chloroa_b-bind|PF00504.17|1.1e-50 S_Transcript_5017:145-855(+)
MAASTMGLSSPSLAGQAVKLSPTASEILGEGRITMRKAAGKAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT*

Click here to download the sequence:
Link to NCBI Protein BLAST