Transcript Information: S_Transcript_50173.p1


Annotated TAIR IDAT1G27750.1
Annotated Gene Namenucleic acid binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9657425-9661750 | Forward length=1075
E-Value3.2E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8487914064097
Replicate 25.9653965109753
Replicate 35.968572659335
Condition 2: 8 Hour
Replicate 17.7530745162954
Replicate 27.7985063061942
Replicate 37.7141378603718
Condition 3: 24 Hour
Replicate 16.9969052777693
Replicate 24.9588872251076
Replicate 35.0150321238126


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50173.p1 GENE.S_Transcript_50173~~S_Transcript_50173.p1 ORF type:5prime_partial len:1202 (+),score=273.64,SPOC|PF07744.9|2.1e-13 S_Transcript_50173:1-3606(+)
CGAAAAAGTCCCACAGTCCATGACTCCCTGTCTGTCTCTCTTCTCGTTATGGCTTCGGCAGAGCAACCTCTAAAGAAGCGAAAAATCTACGAACCTCCGCCACCACTACCACCTCCTTCACAGCCGCCGCCGCCGCCGCCTCCACCGCCACCTCCGCCACCAAAAGAAAATGACGAAACAATCATCGCCCCGCCCCAAACTCCACCGCCATTATCTCACGAAGAAGTTCTTCAAAGACGAAGGAATCAAGAAGAAATTCGGAGTGTATACGAGAATTACAAAACCATCAAGCGTTGTATTTCATTAGGAAAAGACGCTCGTCATATGCCGGAGCTTGAACAAGCTTATCTCTCTCTCATATCTGCTTCTCGAGGTTGTGCAAGTGTTCAGCGTATCTTATCTGAATTTATCCCTCGGTATGCATCATTCTGCCCTACTGCTCTTGAAGCTGCAGCACAAGTTGTTATAAATATGCACAACTGGAATATGCCTGTGATAAGCAGAGGAGAAGATACAGATGGAGTTTCGTTTGAGACTGCTAAGAATTGCATTGCTGGTCTGGTGGACATCTGCCATGCTGCCTCCTTGGAGGCACCTTCATCATCTGTTATCAGAGGCATCTGCTCTGTAGTATTCCTCAATGTTGCTACATTCTTTGCATCCTCTTTGGATGGTAAAGATATTTTCCAAATTATAGGTAAAGAATGTCTAAACATTCATGATTCGACAAAGACATTTGCTCATATGACGCAGAAGGTCCTAAAAGAAGATGCTTCCGCATTTGATAGGTTGTTGAAGTTTCGGGCTTTATGTCTCCTAAGGATCTTCTTTCTTTGCCCTAAAGATATACTTGTTGCTTGTTTCGAGCTCTTCAGCACCAATGCTGCAGATGGATTTTGTAGGGAAGGAAAATACTTCCTCAGTCAGCTGTCAGGTACACTTACATTCAATACTGATGAAAGAGTCCATTTTCTCGATGCAAAAGGAAGATATGATGGTCCTGAAGCTAGCGCAAGTTGTATGCTGGTGGATGGTGCAAAGACTGACATTAATGACAAGAGCCCAGAGTCTGATCATGACCACCTTTATAAAGATGAACAAGATTTACTGAAAAGCTGCTTGCTAGAACTGGTCCTTCGCAGTAATCCTTCCTTGAAGAAATGGATATTCTCTAGGTACCAGAGGCTCCAGAGATCAGCATCTTCTGAAGCTGTGTCTCAAGTCAGTACTGCTTTTGAAGGAATCTTCCAGTCTTTTAGCGAACTAGTTAAATTAACAGATGATGTAGCAGACAGCGATGAGGATGGTTTGGATTCATCCAAATATGTTAGCAGACAATACTTGGTGCATAGAATATCTGATCAACACAGACCCACATGTGAGGTAACTGGAAAAGATTCTGCTTCACAGCCTCGTGATAAATTCTGCAAGGATGAGTTCATGAACAAAATTTCAGGTCAATATCTGAAACGACACAGTTCTATAGCTTCTGTTGAAAGTGACCACCAGTCAAACATTAGTGTTGGTTCCAAGAGCAAGAACTTTGATAGTAAGGAACATGGAGATATGTTGCATGGGTGGTCACCAATTCCTAAGGACCTTAGTGGCCGGTTGCATTCTACTGTGTTGGTAAAACCATCAGAAATCATGACTGATGCCTATGAACAGGGAGGTCAAGCACACCAGGTAGCGTCAAATGCAAGTTCCTTGAGGTTCTCAAGTGGGCTTCTAGGTAATGCTGTGTTTGGAAGCCATCCAGCAGCATCTTATCCGTCTGCATTGAACCAGATTGTTTGGTATTCTGATGGAGACCCTGGAGCAATGGATGTGTTTTCAGCTTCCAAACAGCTCTGGTTAGGTTCTTTGACCCCTGACTCAGCTGAGGCTGCTGTAAGGTATGAAATTGAAAGATTTGGTCCTATAGAAAATTTTTCATTCTTTCCTGCTAAAGGATTTGCACTAGCTGAATATAGAAACATTATTGACGCCATCAAGGCTCGAGAATTCATGAGAAGATGTTCTTCCTGGGGCTATCCTGTTCGTGTCAAATTCATTGATGTTGGGTTGGGAACCAGGGGTGCTGTGGATGGTGTGGCCTTTGGTTCTAGTTGTCATGTTTTTGTGGGCAATGTGCTGAACCAGTGGATGAGGGATGAGATTATGCGAGAAACTATGAAAGCAAGTTGTAAAGGCCCTCGTCTGGTTTCTGAGTTGACAAATGAAAGTGCATTAATCTTGGAGTTTGAGAATCCTGAAGAAGCTGCAAATGCGATGGCAAGTATACGACAGTATCGTAGAGGGTGCAGTAGTTTTACAGGGGCTGTTGGTGCCGGTCTATCTGATATGTCAAGATCACGTCCTGGTTTTTGGAATGCGATGCCTGCTCCTGTCAGTGCTGCCTTAGGAAATATGGGTAACAACAATTTTCTTGGTTCACCTCATGGTCAAACAGTTGAAAGCCCAGCTAACAGGATGCATAATACTGCTGTACCTTTTAAGATCAACCCTGAAGGCATTGCTCCAGAGTTCACATCCCCTAGAGCAGGTTTTGAGCAGCATGGATTGACTATGCGAGGTGGCCAAGTATCTCAATCAAATATCATAGCATCTGGGTGCACTGAGACACCGGGGATAGGAAACATCAGAGGTTCTATGCCTGGCCCGTCAGAACAGATGTGGATGTATCAGAAACCAGATTTTGAACTCCAGTCTGCAGCAGGGACTGTTCAAGGCACACCCATGGCCGCACAGGGACTTCCACCACCTCAGCCTATTCAAGCACCACCTTACATGCGACCTGCTTTTCCTCCACCTACCAGTTCCTGGGATCCTCATAGCCATATGCCTCTTAACTCCATTTCTCCGAGAGTTATGCCTTCTAATGTACATGGTAATTCCATCCCTGCTTTTGTTCAAGGTTCAATGACTCCATTGTCACTGATGCCATACAGTCAAATGGTTCCCCAACCGATTGTACCACCTCTTGTACCATCAATTCCACAACCTCAACATGATATGCTTCCTCCATTGCCACCTTCTCCACCTATGGTCCCCCCTCCACCTAGTTCTCCTCCTCCACCTCCACCCCCACCTGCTGGTGACCCAACTCCACCTAGTTCTGAGCTTTCAAAAATGGTTACTGCTGGAGGCAGCTTGCAGATTCAGTGGCAGGGAACACTGTCAAAAAGTGGAGTCCATTATTGTACTATTTTTGCCCATAGAATTAATTCAGATGTTTGTAAATATTCAATATCTCTCTCAGAGCCTGCTGGGTGGCCAGCAAAATTGGACATGACAAAACGCACAGATCTTCGTCATGTTAAGGCGACATTTACTAGTACCCCTCCATACAGGAGGGAGGTATGCCAGTTGCTGCCATCTTCAGCTGCTGATCATAAAGGATTTCAGGATTTTATCTCGTACTTGAAGCAGAGAGAGTGTGCCGGAGTGATTAAGATCCCAGCTATGAAATCTGTATGGGCCAGGCTACTATTTATTTTACCATATTCTCCAGAGACCTGTTCGATGCTTTCAATTAAGCCAAATGACTCAGATGGCCTTGTTGCTGTGGTTTTGCCGAAGGAGGCAAATTCAGAATGCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50173.p1 GENE.S_Transcript_50173~~S_Transcript_50173.p1 ORF type:5prime_partial len:1202 (+),score=273.64,SPOC|PF07744.9|2.1e-13 S_Transcript_50173:1-3606(+)
RKSPTVHDSLSVSLLVMASAEQPLKKRKIYEPPPPLPPPSQPPPPPPPPPPPPPKENDETIIAPPQTPPPLSHEEVLQRRRNQEEIRSVYENYKTIKRCISLGKDARHMPELEQAYLSLISASRGCASVQRILSEFIPRYASFCPTALEAAAQVVINMHNWNMPVISRGEDTDGVSFETAKNCIAGLVDICHAASLEAPSSSVIRGICSVVFLNVATFFASSLDGKDIFQIIGKECLNIHDSTKTFAHMTQKVLKEDASAFDRLLKFRALCLLRIFFLCPKDILVACFELFSTNAADGFCREGKYFLSQLSGTLTFNTDERVHFLDAKGRYDGPEASASCMLVDGAKTDINDKSPESDHDHLYKDEQDLLKSCLLELVLRSNPSLKKWIFSRYQRLQRSASSEAVSQVSTAFEGIFQSFSELVKLTDDVADSDEDGLDSSKYVSRQYLVHRISDQHRPTCEVTGKDSASQPRDKFCKDEFMNKISGQYLKRHSSIASVESDHQSNISVGSKSKNFDSKEHGDMLHGWSPIPKDLSGRLHSTVLVKPSEIMTDAYEQGGQAHQVASNASSLRFSSGLLGNAVFGSHPAASYPSALNQIVWYSDGDPGAMDVFSASKQLWLGSLTPDSAEAAVRYEIERFGPIENFSFFPAKGFALAEYRNIIDAIKAREFMRRCSSWGYPVRVKFIDVGLGTRGAVDGVAFGSSCHVFVGNVLNQWMRDEIMRETMKASCKGPRLVSELTNESALILEFENPEEAANAMASIRQYRRGCSSFTGAVGAGLSDMSRSRPGFWNAMPAPVSAALGNMGNNNFLGSPHGQTVESPANRMHNTAVPFKINPEGIAPEFTSPRAGFEQHGLTMRGGQVSQSNIIASGCTETPGIGNIRGSMPGPSEQMWMYQKPDFELQSAAGTVQGTPMAAQGLPPPQPIQAPPYMRPAFPPPTSSWDPHSHMPLNSISPRVMPSNVHGNSIPAFVQGSMTPLSLMPYSQMVPQPIVPPLVPSIPQPQHDMLPPLPPSPPMVPPPPSSPPPPPPPPAGDPTPPSSELSKMVTAGGSLQIQWQGTLSKSGVHYCTIFAHRINSDVCKYSISLSEPAGWPAKLDMTKRTDLRHVKATFTSTPPYRREVCQLLPSSAADHKGFQDFISYLKQRECAGVIKIPAMKSVWARLLFILPYSPETCSMLSIKPNDSDGLVAVVLPKEANSECT*

Click here to download the sequence:
Link to NCBI Protein BLAST