Transcript Information: S_Transcript_5018.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value3.8E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14739.5025661268
Replicate 25074.4415982284
Replicate 35436.8240193117
Condition 2: 8 Hour
Replicate 12553.8521916967
Replicate 22391.6844682538
Replicate 32346.2007304013
Condition 3: 24 Hour
Replicate 15137.3751426106
Replicate 25083.3767119
Replicate 34971.6529837008


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5018.p1 GENE.S_Transcript_5018~~S_Transcript_5018.p1 ORF type:complete len:234 (+),score=36.00,Chloroa_b-bind|PF00504.17|1.4e-50 S_Transcript_5018:408-1109(+)
ATGGCTACCTCTACAATCCAACAATCTGCATTTGCTGGGCAAACTGTCTTGAAGCAGCAGAACGAGCTCGTCCGCAAGGTCGGTGGCAATGGCGGCCGTGTCTCCATGCGCCGCACCATCAAGAGCGCTCCTGAGAGCATGTGGTACGGTCCAGACCGGCCAAAGTTCTTGGGTCCATTCTCAGAGCAAACCCCATCATACCTAACAGGTGAATTCCCCGGTGACTACGGTTGGGACACAGCTGGACTGTCAGCAGACCCAGAGACCTTTGCCAAGAACCGTGAGCTGGAGGTGATCCACTGCAGATGGGCCATGTTGGGGGCTTTGGGCTGTGTATTCCCGGAAATCCTCTCGAAGAACGGAGTCAAGTTCGGTGAGGCAGTTTGGTTCAAGGCTGGAGCCCAAATCTTCCAAGAAGGTGGGCTGGACTACCTTGGCAACCCAAACCTGATCCACGCCCAAAGCATCCTGGCCATCTGGGCCTGCCAGGTGGTCCTAATGGGCTTGATCGAGGGCTACAGAGTCGGTGGTGGCCCACTTGGCGAGGGCCTCGACAAGATCTACCCAGGTGGTGCTTTTGACCCACTTGGCTTGGCTGATGACCCTGAGGCCTTTGCTGAGCTTAAGGTTAAGGAGATCAAGAATGGGCGTTTGGCTATGTTCTCAATGTTCGGATTCTTTGTTCAGGCTATTGTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5018.p1 GENE.S_Transcript_5018~~S_Transcript_5018.p1 ORF type:complete len:234 (+),score=36.00,Chloroa_b-bind|PF00504.17|1.4e-50 S_Transcript_5018:408-1109(+)
MATSTIQQSAFAGQTVLKQQNELVRKVGGNGGRVSMRRTIKSAPESMWYGPDRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT*

Click here to download the sequence:
Link to NCBI Protein BLAST