Transcript Information: S_Transcript_502448.p1


Annotated TAIR IDAT5G37280.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14761275-14761925 | Reverse length=216
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3817625878959
Replicate 23.4130282188421
Replicate 33.7700620723382
Condition 2: 8 Hour
Replicate 10.47127934402504
Replicate 20.37080412110044
Replicate 30.23553422767935
Condition 3: 24 Hour
Replicate 12.5344892447651
Replicate 22.5042885719721
Replicate 32.0902246744571


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_502448.p1 GENE.S_Transcript_502448~~S_Transcript_502448.p1 ORF type:complete len:181 (+),score=10.26,zf-rbx1|PF12678.3|3.2e-09,zf-RING_2|PF13639.2|2.2e-08 S_Transcript_502448:62-604(+)
ATGAAGTCCCTGTTTTGGCCGCCTCCTTTGTCCACAGACGCCTTCCCTCAAACAACCACCATGTCCATGATGGAGTTGCAACTGGAACGCCCCATATACAACCCCTTAGCAACTTCACACATCCGGCCTTCAACATTATTCTTGGCCGTACTTGGCTCCTTTATTTTCACCCACACCATCCTCTTTCTCATCAAACTCTACCGTCGATTTTTCGCCCCCGGCTGTTGTGAATTTGATGATCACTTGGACACTGCATTGCTGGTGTTGGTTGATCCTCAAACTATCAAAAAAGTGTCCCAGAATTGCACTCACTGCGCTATTTGCTTGGAAAGCTTAAACGACGACGTTGTTAATACTAGTAATGGCATTCGTGGCAAAAAGAACAAGAGTTCTAAGTGGGTGTTGAACCAATGTGGTCGCAAGTTTCATGACAAGTGCCTTGCTGCTTGGTTTAATCTCGGCCGCCCAAGTTGTCCCCTATGTCGCCGGAGCGTCCCTGTCACGCGCCGCCCACATGATTTCATCAGGGTTGTCCATGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_502448.p1 GENE.S_Transcript_502448~~S_Transcript_502448.p1 ORF type:complete len:181 (+),score=10.26,zf-rbx1|PF12678.3|3.2e-09,zf-RING_2|PF13639.2|2.2e-08 S_Transcript_502448:62-604(+)
MKSLFWPPPLSTDAFPQTTTMSMMELQLERPIYNPLATSHIRPSTLFLAVLGSFIFTHTILFLIKLYRRFFAPGCCEFDDHLDTALLVLVDPQTIKKVSQNCTHCAICLESLNDDVVNTSNGIRGKKNKSSKWVLNQCGRKFHDKCLAAWFNLGRPSCPLCRRSVPVTRRPHDFIRVVHV*

Click here to download the sequence:
Link to NCBI Protein BLAST