Transcript Information: S_Transcript_502797.p1


Annotated TAIR IDAT4G18180.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10065626-10067317 | Forward length=414
E-Value1.1E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.19654737619477
Replicate 20.20619215336154
Replicate 30.1964594249307
Condition 3: 24 Hour
Replicate 10
Replicate 20.2088830560032
Replicate 30.11623061937842


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_502797.p1 GENE.S_Transcript_502797~~S_Transcript_502797.p1 ORF type:5prime_partial len:217 (+),score=39.54,Glyco_hydro_28|PF00295.13|6.1e-48,Pectate_lyase_3|PF12708.3|1.6e-09 S_Transcript_502797:2-652(+)
GCTGATGGTAGAACTGATGACAGCAAGGCTTTCAATGCAGCTTGGGAGAAGGCATGTAATTCTCAAGGCAAAGTAACTGTTTTGGTACCTAAAGGGACTTATCTTGTTGGCCCTCTTCGATTTACAGGTCCTTGTCAGAAAGTTTCATCCCTCACATTTCTTTTGCAGGGTCATTTGAAGGCAACAACGGAGTTAACTGAGTACGAATATGGATCAGGGTGGATTGAATTTTCCTGGATCGAGGGGTTAACTTTGAGAGGAGATGGGGTTTTTGATGGACAAGGGGCCAAAGCTTGGCCTTACAATCAGTGCACTACAACTTCCAACTGTCATCTCCTTCCTACTAATCTGAAGTTTGTGGGAATGAACAGAACAATCATTCACAGAATAACCTCGTTGAACAGCAAGTTTTTCCATATAGCTCTGGTAGAATGCAGAGACTTCAGGGGCAGCAACCTTCAGATTATTGCCCCAGAGGACAGTCCAAATACAGATGGAATTCACCTCGAGCGAAGCTCAGATGTTTGGTTCTCAAAGTCGAAAATTGGCACTGGGGATGATTGCATCTCTGTTGGCCAAGGGAATTCTCAAATCACCTTAACTGACATCACTTGCGGTCCTGGTCATGGTATAAGTGACCATCAAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_502797.p1 GENE.S_Transcript_502797~~S_Transcript_502797.p1 ORF type:5prime_partial len:217 (+),score=39.54,Glyco_hydro_28|PF00295.13|6.1e-48,Pectate_lyase_3|PF12708.3|1.6e-09 S_Transcript_502797:2-652(+)
ADGRTDDSKAFNAAWEKACNSQGKVTVLVPKGTYLVGPLRFTGPCQKVSSLTFLLQGHLKATTELTEYEYGSGWIEFSWIEGLTLRGDGVFDGQGAKAWPYNQCTTTSNCHLLPTNLKFVGMNRTIIHRITSLNSKFFHIALVECRDFRGSNLQIIAPEDSPNTDGIHLERSSDVWFSKSKIGTGDDCISVGQGNSQITLTDITCGPGHGISDHQE*

Click here to download the sequence:
Link to NCBI Protein BLAST