Transcript Information: S_Transcript_50329.p1


Annotated TAIR IDAT4G36860.1
Annotated Gene NameLIM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17358580-17361189 | Reverse length=553
E-Value3.4E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.785598479842
Replicate 231.87779479793
Replicate 328.856220146014
Condition 2: 8 Hour
Replicate 155.70548725426
Replicate 251.336162182795
Replicate 348.953505526269
Condition 3: 24 Hour
Replicate 141.530196750179
Replicate 232.61693034847
Replicate 335.435533869545


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50329.p1 GENE.S_Transcript_50329~~S_Transcript_50329.p1 ORF type:complete len:526 (+),score=98.63,DUF3633|PF12315.4|5.2e+03,DUF3633|PF12315.4|2.4e-99,LIM|PF00412.18|2.9e-09,LIM|PF00412.18|0.049,LIM|PF00412.18|4.7e+02 S_Transcript_50329:216-1793(+)
ATGGGTTGGCTGAGTAAGATTTTTGGAGGCTCCAGTCATAACCATAGAGGGCATTATCATGGCAGATATGGCGAGGACACAATCTGGGATGGCCCTACCACTTCCGCGGATGCATATTCAGACTATGACAATGAAGATATCGATCGTGCAATTGCATTGTCCCTTGCGGAAGAAGAGGAGAGGGAGCTGAAAAGAAAAGAAGAAGAAGAGAGGGAACTGGAAAGGAAAGAAGAAGAGGAGAGAGAACATAAAAGAAAAGCGGAAGAGGATCAGAAAGGCAAAAAGGTGATTGATCATGATTGTCAATTGGAGGAAGATGAACTTCTCGCCAAGGCTCTTCAAGAAAGTTTAAACATGGAATCTCCTCCTCGAACTCCACCGCGATCTCCTCCCAGACATGATAAGGGCAGTATGTGGCAACCATATCCGTTCTTTACTTATGGATTCAGTCGGACTTGTTCTGGTTGCGGTGCTGAGATTGGTCGTGGACGTTATTTAAGCTGTATGGGAGGGTTTTGGCACCCAGAATGCTTCCGTTGTCATGCTTGCAATGAGACAATATCTGACTATGAGTTCTCTATGTCACGGAATCGTCCATACCATAAATCTTGCTACAAGGAGCAGCACCATCCAAAGTGTGATGTCTGCAGAAACTTTATACCAACAAACGCAGCTGGACTTATCGAGTATAGAGCACATCCTTTCTGGATGCAAAAGTACTGCCCTGCACATGAACATGACAGGACTCCAAGGTGCTGTAGCTGTGAAAGAATGGAGCCAAGGGACACGGAATACTTGGTACTTGATGATGGTCGGAAGCTATGCTTGGAGTGTCTAGATTCTGCTATCATGGATACTAATGAATGCCAACCACTTTATATTGAGATCCGAGAATTTTATGAAGGATTGAACATGAAAGTGGAACAACAAATACCATTACTCCTTGTGGAGAGGCAAGCACTAAATGAGGCTATGGAAGGAGAAAAACAAGGCCATCATCACTTGCCAGAGACAAGAGGACTCTGTCTATCAGAAGAGCAGACTGTCCGCACGATTTTGAGAAGGCCACAGATGGGAGGGCACCGAATTTTCGACATGATCTCAGAGCCATACAGGCTGGTTCGGCGTTGTGAAGTCACGGCAATACTGATTTTGTTTGGCCTTCCCAGGCTATTAACAGGGTCCATCCTGGCTCATGAAATGATGCACGCATGGCTGAGACTCAATGGTTACCCGAATCTGAGACCTGAGGTCGAAGAAGGAATATGCCAGGTGCTAGCCCATATGTGGTTAGACTCTGAAATCATGGCAGGTGGTGCATCATCCTCTTCCTCAACTTCATCTTCAGATTCTGGATCATCATCATCATCTTCATCTTCTTCAAGTAGCGGTTCATCAAAGAAAGGAAAGCGATCCCAGTTTGAGAGGAAACTTGGTGAATTTTTCAAGCACCAAATTGAGTCAGATGCTTCACCTGCATATGGGGAGGGATTCAGAATAGGTAACCAAGCAGTGCTCAAGTATGGACTACGGAGGACCCTTGATCACATCAAATTAACGGGGACATTCCCCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50329.p1 GENE.S_Transcript_50329~~S_Transcript_50329.p1 ORF type:complete len:526 (+),score=98.63,DUF3633|PF12315.4|5.2e+03,DUF3633|PF12315.4|2.4e-99,LIM|PF00412.18|2.9e-09,LIM|PF00412.18|0.049,LIM|PF00412.18|4.7e+02 S_Transcript_50329:216-1793(+)
MGWLSKIFGGSSHNHRGHYHGRYGEDTIWDGPTTSADAYSDYDNEDIDRAIALSLAEEEERELKRKEEEERELERKEEEEREHKRKAEEDQKGKKVIDHDCQLEEDELLAKALQESLNMESPPRTPPRSPPRHDKGSMWQPYPFFTYGFSRTCSGCGAEIGRGRYLSCMGGFWHPECFRCHACNETISDYEFSMSRNRPYHKSCYKEQHHPKCDVCRNFIPTNAAGLIEYRAHPFWMQKYCPAHEHDRTPRCCSCERMEPRDTEYLVLDDGRKLCLECLDSAIMDTNECQPLYIEIREFYEGLNMKVEQQIPLLLVERQALNEAMEGEKQGHHHLPETRGLCLSEEQTVRTILRRPQMGGHRIFDMISEPYRLVRRCEVTAILILFGLPRLLTGSILAHEMMHAWLRLNGYPNLRPEVEEGICQVLAHMWLDSEIMAGGASSSSSTSSSDSGSSSSSSSSSSSGSSKKGKRSQFERKLGEFFKHQIESDASPAYGEGFRIGNQAVLKYGLRRTLDHIKLTGTFPC*

Click here to download the sequence:
Link to NCBI Protein BLAST