Transcript Information: S_Transcript_503427.p2


Annotated TAIR IDAT1G15820.1
Annotated Gene Namelight harvesting complex photosystem II subunit 6
Annotated Gene Symbol(s)LHCB6, CP24
Annotation TypeOrtholog
Chromosome Positionchr1:5446685-5447676 | Reverse length=258
E-Value3.3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.17905569013204
Condition 2: 8 Hour
Replicate 10.20704262443818
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.2120862474815
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_503427.p2 GENE.S_Transcript_503427~~S_Transcript_503427.p2 ORF type:internal len:103 (+),score=-7.58,Chloroa_b-bind|PF00504.17|1.1e-26 S_Transcript_503427:2-307(+)
ATCCCGGCCTTCAAGAGCGACGCCGAGTTCATCAACCCGCCGTGGCTCGATGGCTCGCTCCCCGGTGACTTCGGCTTCGACCCGCTGGGGCTGGGCAAGGACCCGGCGTTCCTCAAGTGGTACAGGGAGGCGGAGCTGATCCACGGGCGGTGGGCGATGGCGGCGGTGCTGGGGATCTTCGTCGGGCAGGCGTGGAGCGGCGTGCCGTGGTTCGAGGCCGGCGCGCAGCCGGAGGCCATCGCGCCCTTCTCCTTCGGCTCCCTCCTCGGGACGCAGCTGCTGCTCATGGGCTGGGTAGAGTCCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_503427.p2 GENE.S_Transcript_503427~~S_Transcript_503427.p2 ORF type:internal len:103 (+),score=-7.58,Chloroa_b-bind|PF00504.17|1.1e-26 S_Transcript_503427:2-307(+)
IPAFKSDAEFINPPWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGAQPEAIAPFSFGSLLGTQLLLMGWVESK

Click here to download the sequence:
Link to NCBI Protein BLAST