Transcript Information: S_Transcript_503584.p1


Annotated TAIR IDAT1G09880.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3208828-3211653 | Reverse length=631
E-Value2E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.096075816733504
Replicate 20.23894717932327
Replicate 30
Condition 2: 8 Hour
Replicate 10.15397393730782
Replicate 20.080764796533309
Replicate 30.23085755528861
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.18210862386365


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_503584.p1 GENE.S_Transcript_503584~~S_Transcript_503584.p1 ORF type:internal len:277 (+),score=36.85,CBM-like|PF14683.2|1.6e-44,fn3_3|PF14686.2|2.1e-27,fn3_3|PF14686.2|1e+02,CarboxypepD_reg|PF13620.2|1.7e-05,CarboxypepD_reg|PF13620.2|7.2e+02 S_Transcript_503584:1-828(+)
GATTTTCCCAAGTCTAACCAACGCGGATCAGTTGCAGGCAGGTTATTAGTCAATGACAGATTTAAAGAACCAAAGCCTGCTGCTTCTGGGTGGGTTGGTCTAGCTGCACCAGGTGCTGCAGGCTCATGGCAGACTGAAATGAAGGGTTACCAGTTTTGGACCCAGACAGATGCTAGCGGAAACTTTGAGATCAGAAATGTTCATGTGGGCAAGTATAGCGTATATGCCTCCGTTCCTGGTTTCATAGGCAGCTTCAAATCTGCAACTGATGTCATCATCACACCAGGGAAGCATATGAATCTAGGTGATCTAGTTTACTTACCCCCAAGAAGTGAACCCACACTGTGGGAAATCGGAGTACCTGACCGCACTGCAGCTGAGTTCTTCGTGCCTGACCCTAACCCCAACCTCACCAATCGACTTTTCTTTCATGATGGGCAGAACAAGTACAGACAATATGGTTTGTGGGATCGATACACTGAGCTTTACCCAAAGAATGATCTCGTTTACACAGTTGGCATGAGTGATTTTCGCAAGGATTGGTTTTTCGCTCAAGTGCTTAGGAGAGAAAATGGCAAGTACGAGCCAACAACATGGCAGATCAAATTCCCGATGAAGAATGTAACACCAAACACAAAATATACTCTACAAATCGCGCTTGCATCTGCAAGCCAAGCTGAATTGCAGGTTAGGATCAACAATCCAGACTTGAAAGCTCGTCCCCTTTTTACGACATTAATGATAGGAAGAGATAACGCGATTGCAAGACATGGGATTCATGGATTGTATTGGTTGTATACTATTGATGTGCCAAGTGCATTGCTTCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_503584.p1 GENE.S_Transcript_503584~~S_Transcript_503584.p1 ORF type:internal len:277 (+),score=36.85,CBM-like|PF14683.2|1.6e-44,fn3_3|PF14686.2|2.1e-27,fn3_3|PF14686.2|1e+02,CarboxypepD_reg|PF13620.2|1.7e-05,CarboxypepD_reg|PF13620.2|7.2e+02 S_Transcript_503584:1-828(+)
DFPKSNQRGSVAGRLLVNDRFKEPKPAASGWVGLAAPGAAGSWQTEMKGYQFWTQTDASGNFEIRNVHVGKYSVYASVPGFIGSFKSATDVIITPGKHMNLGDLVYLPPRSEPTLWEIGVPDRTAAEFFVPDPNPNLTNRLFFHDGQNKYRQYGLWDRYTELYPKNDLVYTVGMSDFRKDWFFAQVLRRENGKYEPTTWQIKFPMKNVTPNTKYTLQIALASASQAELQVRINNPDLKARPLFTTLMIGRDNAIARHGIHGLYWLYTIDVPSALLR

Click here to download the sequence:
Link to NCBI Protein BLAST