Transcript Information: S_Transcript_50391.p2


Annotated TAIR IDAT5G64960.1
Annotated Gene Namecyclin dependent kinase group C2
Annotated Gene Symbol(s)CDKC2, CDKC;2
Annotation TypeOrtholog
Chromosome Positionchr5:25955497-25958427 | Forward length=513
E-Value1.5E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1956193351743
Replicate 25.6032481415911
Replicate 34.5862888673504
Condition 2: 8 Hour
Replicate 15.0774738850317
Replicate 24.8531523504169
Replicate 35.9774599103916
Condition 3: 24 Hour
Replicate 13.9297674004244
Replicate 26.1156316952048
Replicate 36.2721486086797


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50391.p2 GENE.S_Transcript_50391~~S_Transcript_50391.p2 ORF type:5prime_partial len:189 (+),score=24.96,Pkinase|PF00069.21|1.6e-20,Pkinase_Tyr|PF07714.13|1.5e-09 S_Transcript_50391:2-568(+)
TTCTTTCTTCTTGCTTTCCATTTTGTCTTCCCACTAAAAAACTATTACTACCCTTTAAACTTCTCTGTAAATCAGACCCTACTCTTTCTTTCTCGATCATCTCTCTTTCTTCGCCAAACCCTAGCTATGGCGGTAGCAGCCCCAGGGCAGCTCAATCTTCACGAGTCGCCATCATGGGGATCTAGAAGCGTCGATTGTTTCCAGAAATTGGAACAAATTGGTGAAGGAACTTACGGGCAAGTTTACATGGCGAGAGAAATTCAAACCGGAGAAACTGTGGCATTGAAGAAAATAAGAATGGACAATGAAAAAGAAGGGTTTCCAATCACTGCCATACGTGAAATCAAGATTCTAAAAAAGCTGCATCATGAAAATGTAATCAAACTAAAGGAGATCGTAACATCCCCTGGTCCTGAGAAGGATGAGCAAGCCAGACCAGATGGTAATAAATATAAAGGTGGCATATATATGGTCTTTGAGTACATGGATCATGATCTGACTGGTCTTGCTGATAGGCCGGGGATGAGGTTTTCTGTTCCACAGATTAAGGTTCAAATCTCCTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50391.p2 GENE.S_Transcript_50391~~S_Transcript_50391.p2 ORF type:5prime_partial len:189 (+),score=24.96,Pkinase|PF00069.21|1.6e-20,Pkinase_Tyr|PF07714.13|1.5e-09 S_Transcript_50391:2-568(+)
FFLLAFHFVFPLKNYYYPLNFSVNQTLLFLSRSSLFLRQTLAMAVAAPGQLNLHESPSWGSRSVDCFQKLEQIGEGTYGQVYMAREIQTGETVALKKIRMDNEKEGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQARPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKVQISL*

Click here to download the sequence:
Link to NCBI Protein BLAST