Transcript Information: S_Transcript_504246.p1


Annotated TAIR IDAT1G20960.1
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase, putative
Annotated Gene Symbol(s)emb1507
Annotation TypeOrtholog
Chromosome Positionchr1:7302591-7309914 | Reverse length=2171
E-Value1.6E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.17076607484815
Condition 2: 8 Hour
Replicate 11.1847439065074
Replicate 20.20714674666413
Replicate 30.59210687791615
Condition 3: 24 Hour
Replicate 10.20226743972772
Replicate 20.2098501071884
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_504246.p1 GENE.S_Transcript_504246~~S_Transcript_504246.p1 ORF type:5prime_partial len:108 (+),score=12.85 S_Transcript_504246:1-324(+)
TTAGGATCACAGACTGTTTTACCTGTTTCTTTCAGACACCTTATTTTGCCTGAGAAATATCCTCCCCCTATTGAGCTGTTAGACTTGCAACCACTGCCCGTGACTGCACTAAGGAATCCAAAATACGAAGCTCTCTATCGGGAATTCAAGTACTTCTATCCTGTTCAAACTCAAGTCTTCAATGTTTTGTACATCTCAGATGACAATGTCATGGTGGCAGCACCGGCAGGTAGTGGTAAGACCATATATGCTGAGTTTGCTGTTCTCCGGAATCATCAAAATCTTAAAGATCCTGAGAGCTTAATGCGCGTTGTCTATATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_504246.p1 GENE.S_Transcript_504246~~S_Transcript_504246.p1 ORF type:5prime_partial len:108 (+),score=12.85 S_Transcript_504246:1-324(+)
LGSQTVLPVSFRHLILPEKYPPPIELLDLQPLPVTALRNPKYEALYREFKYFYPVQTQVFNVLYISDDNVMVAAPAGSGKTIYAEFAVLRNHQNLKDPESLMRVVYI*

Click here to download the sequence:
Link to NCBI Protein BLAST