Transcript Information: S_Transcript_50432.p1


Annotated TAIR IDAT4G05180.1
Annotated Gene Namephotosystem II subunit Q-2
Annotated Gene Symbol(s)PSBQ, PSBQ-2, PSII-Q
Annotation TypeOrtholog
Chromosome Positionchr4:2672093-2673170 | Reverse length=230
E-Value1.1E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11562.5471109835
Replicate 21610.3007814222
Replicate 31809.0432535337
Condition 2: 8 Hour
Replicate 12123.8812877811
Replicate 22317.5896704086
Replicate 32214.9351902356
Condition 3: 24 Hour
Replicate 11900.1314468699
Replicate 21907.1500587601
Replicate 32104.9628426817


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50432.p1 GENE.S_Transcript_50432~~S_Transcript_50432.p1 ORF type:complete len:234 (+),score=62.74,PsbQ|PF05757.7|1.7e-82 S_Transcript_50432:248-949(+)
ATGGCCCAAGCTATGGCTTCAATGGCAGGCTTACGTGGCTCTTCACAAGCAGTCTTGGAAGGCAGCCTCCAGCTCAGCGGCTCGAACCGCCTTAGTGGGCCCAGCTCTAGCCGTGTGGCTGTGCCTAGATTGGGCCTGGCCGTGAAAGCCCAACATCAAGTGTCAGTTGAGGCTGCTGAAACCAGCCGCCGGGCTGTGTTGGGCCTAGTGGCTGCTGGGCTCGCTTCTGGTTCTTTTGTTCAAGCTGTTCTTGCTGAGGCTAAGCCCATTCCTCTTGGCCCACCTCCTCCTCCCTCTGGGGGTCTTCGTGGGACACTAAACTCCGACGAGGCAAGAGACTTGAAGTTGCCTCTTAAGAACAGGTTCTACCTTCAACCCCTCCCCCCAACCGAGGCTGCCCAAAGAGCCAAGGAGTCAGCCAAGGAGATTCTCAACGTCAAGGGATTGATCGAGAAGAAGGCATGGCCATACGTACAGAATGACCTTCGCCTCAGGGCTGGGTACCTCCGATATGACCTCGACACTGTCATCTCTGCCAAGCCCAAGGACGAGAAGAAATCTTTCAAGGCTCTCACTGACAAGCTCTTCAAAGATATTGGCAATCTTGATTATGCTGCAAAGACAAAGGATAGTTCCAAAGCTGAGCAATATTATGCTGAGACCGTATCTAGCCTCAATGATGTTCTTACCAAGCTTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50432.p1 GENE.S_Transcript_50432~~S_Transcript_50432.p1 ORF type:complete len:234 (+),score=62.74,PsbQ|PF05757.7|1.7e-82 S_Transcript_50432:248-949(+)
MAQAMASMAGLRGSSQAVLEGSLQLSGSNRLSGPSSSRVAVPRLGLAVKAQHQVSVEAAETSRRAVLGLVAAGLASGSFVQAVLAEAKPIPLGPPPPPSGGLRGTLNSDEARDLKLPLKNRFYLQPLPPTEAAQRAKESAKEILNVKGLIEKKAWPYVQNDLRLRAGYLRYDLDTVISAKPKDEKKSFKALTDKLFKDIGNLDYAAKTKDSSKAEQYYAETVSSLNDVLTKLG*

Click here to download the sequence:
Link to NCBI Protein BLAST