Transcript Information: S_Transcript_50434.p1


Annotated TAIR IDAT4G05180.1
Annotated Gene Namephotosystem II subunit Q-2
Annotated Gene Symbol(s)PSBQ, PSBQ-2, PSII-Q
Annotation TypeOrtholog
Chromosome Positionchr4:2672093-2673170 | Reverse length=230
E-Value1.7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1181.91311233918
Replicate 2203.81815115038
Replicate 3254.44588700621
Condition 2: 8 Hour
Replicate 1143.00012814389
Replicate 2135.10272230484
Replicate 3133.24711663027
Condition 3: 24 Hour
Replicate 1255.23524043772
Replicate 2264.99980548794
Replicate 3166.2907949307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50434.p1 GENE.S_Transcript_50434~~S_Transcript_50434.p1 ORF type:complete len:231 (+),score=54.50,PsbQ|PF05757.7|1.3e-66 S_Transcript_50434:248-940(+)
ATGGCCCAAGCTATGGCTTCAATGGCAGGCTTACGTGGCTCTTCACAAGCAGTCTTGGAAGGCAGCCTCCAGCTCAGCGGCTCGAACCGCCTTAGTGGGCCCAGCTCTAGCCGTGTGGCTGTGCCTAGATTGGGCCTGGCCGTGAAAGCCCAACATCAAGTGTCAGTTGAGGCTGCTGAAACCAGCCGCCGGGCTGTGTTGGGCCTAGTGGCTGCTGGGCTCGCTTCTGGTTCTTTTGTTCAAGCTGTTCTTGCTGAGGCTAAGCCCATTCCTCTTGGCCCACCTCCTCCTCCCTCTGGGGGTCTTCGTGGGACACTAAACTCCGACGAGGCAAGAGACTTGAAGTTGCCTCTTAAGAACAGGTTCTACCTTCAACCCCTCCCCCCAACCGAGGCTGCCCAAAGAGCCAAGGAGTCAGCCAAGGAGATTCTCAACGTCAAGGGATTGATCGAGAAGAAGGCATGGCCATACGTACAGAATGACCTTCGCCTCAGGGCTGGGTACCTCCGATATGACCTCGACACTGTCATCTCTGCCAAGCCCAAGGACGAGAAGAAATCTTTCAAGGCTCTCACTGACAAGCTCTTCCAAGATATTGGCAATGAAGTCGTTTCTCCTATCATCACTAGCATAGATATTTTTCCCTTCGTTCCAAAATCAACTTCTTACTCTCTTAGTAATTTACAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50434.p1 GENE.S_Transcript_50434~~S_Transcript_50434.p1 ORF type:complete len:231 (+),score=54.50,PsbQ|PF05757.7|1.3e-66 S_Transcript_50434:248-940(+)
MAQAMASMAGLRGSSQAVLEGSLQLSGSNRLSGPSSSRVAVPRLGLAVKAQHQVSVEAAETSRRAVLGLVAAGLASGSFVQAVLAEAKPIPLGPPPPPSGGLRGTLNSDEARDLKLPLKNRFYLQPLPPTEAAQRAKESAKEILNVKGLIEKKAWPYVQNDLRLRAGYLRYDLDTVISAKPKDEKKSFKALTDKLFQDIGNEVVSPIITSIDIFPFVPKSTSYSLSNLQR*

Click here to download the sequence:
Link to NCBI Protein BLAST