Transcript Information: S_Transcript_50480.p1


Annotated TAIR IDAT1G08700.1
Annotated Gene NamePresenilin-1
Annotated Gene Symbol(s)PS1
Annotation TypeOrtholog
Chromosome Positionchr1:2769885-2771348 | Reverse length=453
E-Value2.4E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3144397142716
Replicate 23.3134592375755
Replicate 34.1884602094624
Condition 2: 8 Hour
Replicate 12.1091045368593
Replicate 24.0154600122586
Replicate 33.123201114283
Condition 3: 24 Hour
Replicate 14.0809123004407
Replicate 22.8225992439407
Replicate 33.9727029649084


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50480.p1 GENE.S_Transcript_50480~~S_Transcript_50480.p1 ORF type:3prime_partial len:273 (+),score=60.57,Presenilin|PF01080.13|2.7e-72 S_Transcript_50480:184-999(+)
ATGGAGGGCAGCATACTTGAATTCATAGGCACAGAGCTAATCGGAGTAATGTCCCCAGTCTCAATCTGTATGCTCTTAGTTGTTCTCTTAGTCTACACTCTTTCCCCATCTTCATCTTCTCTCTCCTCCACGTCATCATCCTCTCAAACCCCAATCATTACAGCAGCTAATCTCGTATATTCCGAAAACCCCTCAGATTCCCCTGCTCAGAAACTCGAAGGTGCTGCCTTAAACGCTGTCGTTTTTGTCATTTTAATAGCAGCTGTTACTTTCCTTCTTGTATGTCTTTACTACTACAACTTCACCAATTTTCTTAAGAGCTACATGAGATTATCTGCTTTTCTTATACTGGGTACAATGGGTGGGGCCATATTTTTGTCATTGATTCAGCATTTTAATGTGCCCATTGATGCCATATCTTGTTTTGTGGTACTTTTCAACTTTGCTGCACTTGGGGTTGTTTCAGTTTTTGGGAAAGGCGTGCCCATTATTGTTACTCAATGTTATACTGTTACCTTGGGGATTATTACTGCTGCTTGGTTTACTCAGTTGCCTGAATGGACTACTTGGGTTTTGTTGGTTGCTTTGGCTCTTTATGATTTGGTGGCTGTTTTGGCTCCTGGTGGACCTTTGAAGATTCTTGTTGAGTTGTCTCAGTCTAGGGATGATGATTTGCCTGCTTTGGTGTATGAGGCTAGGCCTACTGTTTCGGTTTCAGGTGGTGGTGGTGGTGGCGGGAGGAGGAGTTTGGGTCTTTTGGTTGGTGGGGTTTCGGATAATCAAGCCGTTCAGGTTCAGAACTTGTCTAGGAATGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50480.p1 GENE.S_Transcript_50480~~S_Transcript_50480.p1 ORF type:3prime_partial len:273 (+),score=60.57,Presenilin|PF01080.13|2.7e-72 S_Transcript_50480:184-999(+)
MEGSILEFIGTELIGVMSPVSICMLLVVLLVYTLSPSSSSLSSTSSSSQTPIITAANLVYSENPSDSPAQKLEGAALNAVVFVILIAAVTFLLVCLYYYNFTNFLKSYMRLSAFLILGTMGGAIFLSLIQHFNVPIDAISCFVVLFNFAALGVVSVFGKGVPIIVTQCYTVTLGIITAAWFTQLPEWTTWVLLVALALYDLVAVLAPGGPLKILVELSQSRDDDLPALVYEARPTVSVSGGGGGGGRRSLGLLVGGVSDNQAVQVQNLSRND

Click here to download the sequence:
Link to NCBI Protein BLAST