Transcript Information: S_Transcript_50495.p1


Annotated TAIR IDAT1G68070.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25515412-25516767 | Reverse length=343
E-Value3.6E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.899842675754
Replicate 238.768296010986
Replicate 342.808335191438
Condition 2: 8 Hour
Replicate 144.822295575175
Replicate 238.96089567284
Replicate 341.908180800394
Condition 3: 24 Hour
Replicate 148.537848173618
Replicate 242.960645442371
Replicate 339.051363791733


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50495.p1 GENE.S_Transcript_50495~~S_Transcript_50495.p1 ORF type:5prime_partial len:383 (+),score=59.50,zf-RING_2|PF13639.2|1.2e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.3e-12,zf-rbx1|PF12678.3|1.2e-05,zf-RING_11|PF17123.1|1.1e-05,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|7.1e-06 S_Transcript_50495:2-1150(+)
GACCAAGCCATGTCTGAATCGACGGAAACTGCAGGGGCGCCACTACTCCGGCCACGGCAGGGCCTGGACACATCTTTGGACACCACAAACACAAACCGTATCCCTCAAACAACAGCCCTAGCCCTCCTATTGGGCCGGGCCGCCGGTCGTCGAGGCCCATCCATGCTTGTCAGGGAAACAGCAGCTCGTGAGCTCGAAGAGCGTCGCGCTGACTGGGGTTACTCCAAACCTGTCGTGGCTCTTGACATGGTCTGGAATATGACCTTCGTTATGGCCTCCTTAATCATGCTCATATTCACCCCCACCGAGCACCCCAACGTTCCTATTAGGGTTTGGATCTGTGGCTACGCTTTGCAGTGCTTTGTGCACGTCGTGTTGGTCTGGTTCGAGTATCGCAGGAGGTTGTCAAGGAGGAGAGAGAGTGTCAATGGTCTTGCTTCTGGTGCTGGTGTTAGTCGTGCTGGTGATTTGGAGAGTGGTGAGTTCGGGGGTCGGTTTGTGTATGATGGGAATGATAGCGATGGCGATGATGATGATGGTGCTATTGGGATGTTTGGGTCTGCTTCTGGGTCGAGTTTTGCTAAAAAGTGCGAGTCAGTAAACACAATGGCTTCATTTCTCTGGTGGATAGTTGGCTTCTACTGGGTTGTCTCTGGTGGTGAACAGCTACTGCAAGATGCCACGCAGCTATACTGGTTGACCGTTGTTTATCTGGCATTTGATGTTTTCTTTGCCATATTCTGTGTTGTCCTGGCCTGTTTGATAGGGATTGCCCTCTGCTGCTGTTTGCCATGTATCATCGCGATTCTTTATACTGTGGCTGGACAAGAAGGTGCTTCTGAGGCAGAGCTCAGTATGCTTCCAAAATATAGATTTCGAGTTTCAAATAATGACGAAAAGCCAGGTGTAGGAGCTGGAGTGATGATCCCTGTAGAGACTGTCAGTGGATACTTGGCAATGGAACGTGTTCTTTTACCTGAGGATGCAGAGTGTTGTATCTGTCTCTGTTTGTATGATGACGGTGCAGAGCTCCATGCTCTTCCATGCAACCATCACTTCCACACGACCTGCATTGTGAAATGGCTCAAGATGAATGCAACATGTCCTCTTTGCAAATACAACATCCTCAAAGGAAATGAACAGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50495.p1 GENE.S_Transcript_50495~~S_Transcript_50495.p1 ORF type:5prime_partial len:383 (+),score=59.50,zf-RING_2|PF13639.2|1.2e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.3e-12,zf-rbx1|PF12678.3|1.2e-05,zf-RING_11|PF17123.1|1.1e-05,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|7.1e-06 S_Transcript_50495:2-1150(+)
DQAMSESTETAGAPLLRPRQGLDTSLDTTNTNRIPQTTALALLLGRAAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMVWNMTFVMASLIMLIFTPTEHPNVPIRVWICGYALQCFVHVVLVWFEYRRRLSRRRESVNGLASGAGVSRAGDLESGEFGGRFVYDGNDSDGDDDDGAIGMFGSASGSSFAKKCESVNTMASFLWWIVGFYWVVSGGEQLLQDATQLYWLTVVYLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYTVAGQEGASEAELSMLPKYRFRVSNNDEKPGVGAGVMIPVETVSGYLAMERVLLPEDAECCICLCLYDDGAELHALPCNHHFHTTCIVKWLKMNATCPLCKYNILKGNEQV*

Click here to download the sequence:
Link to NCBI Protein BLAST