Transcript Information: S_Transcript_505475.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.23553422767935
Condition 3: 24 Hour
Replicate 10.3620698921093
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_505475.p1 GENE.S_Transcript_505475~~S_Transcript_505475.p1 ORF type:3prime_partial len:181 (+),score=17.95,RVT_1|PF00078.23|2.1e-15 S_Transcript_505475:370-909(+)
ATGGGACTTCCTATATTACTCCCTGAAGTCATCATGGAGTGTATTACCTCGGTCTCAATGAAGATATTATGGAATGGGGAACCGACTGAGGGTTTCAAACCCTCAAGGGGGATTAGACAAGGTGACCCCCTTTCGCCTTATCTCTTTGTTATGTGTATTGAACGCCTTAATCAACTTATTGAGCAAGCTGTGAGAGATGGGAAGTGGAAGCCGATATCATGTAATAGAGGTGGTCCCCTACTTTCTAATCTCTTCTTCGCAGATGATATGATTCTATTTGCCGAAGCGGATGTCATCCAAGCACAAAATATAAAGGAAATTCTGGATATCTTTTGTGAAGCTTCTGGGCAGAAAGTTTCCTACGAGAAATCACGAGTTTTCTTCTCAAGCAATGTTGACCGAGCTTTAGTGGATGAGATAAGCTCGAGCCTCGGTATACCTATCACTGATGATCTGGGCATATATCTTGGTATGCCGTTAATCAATGGTAGAGTAACTAGAGCGACATATCAACATATAGTGGACAAGGTAGACAAGCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_505475.p1 GENE.S_Transcript_505475~~S_Transcript_505475.p1 ORF type:3prime_partial len:181 (+),score=17.95,RVT_1|PF00078.23|2.1e-15 S_Transcript_505475:370-909(+)
MGLPILLPEVIMECITSVSMKILWNGEPTEGFKPSRGIRQGDPLSPYLFVMCIERLNQLIEQAVRDGKWKPISCNRGGPLLSNLFFADDMILFAEADVIQAQNIKEILDIFCEASGQKVSYEKSRVFFSSNVDRALVDEISSSLGIPITDDLGIYLGMPLINGRVTRATYQHIVDKVDKR

Click here to download the sequence:
Link to NCBI Protein BLAST