Transcript Information: S_Transcript_505475.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21994215896843
Replicate 20.36467420756223
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.18489131107212
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_505475.p2 GENE.S_Transcript_505475~~S_Transcript_505475.p2 ORF type:5prime_partial len:121 (+),score=6.35,RVT_1|PF00078.23|2.2e-11 S_Transcript_505475:2-364(+)
CAACGCAATTGGGACAGGGTACAACAGAGTGTTTGTCGCACTGTTAAAGATATTCTAGAGGGGCGAGGGATACCTCCCTCCCTCAATGAGACGTTTTTGGCTCTCATACCCAAAGTTGAAGCGCCACAAACAGTCAAACAATTTCGCCCCATAGGCCTTTGTAATGTCTTATATAAAATTGTGACCAAGACCATTGTCAATCGCATTAAGCCTCTACTTCCGAAGCTGATTTCCCCTACGCAAGTGAGTTTTGTTCCAGGTAGGCAAATTACTGACAATGTGGTCATAGTCCAAGAGGTAGGCAAATTGACTTGGAGAAGGCCTATGACAGGCTTAAATGGAGTTTCATTGCCGACACACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_505475.p2 GENE.S_Transcript_505475~~S_Transcript_505475.p2 ORF type:5prime_partial len:121 (+),score=6.35,RVT_1|PF00078.23|2.2e-11 S_Transcript_505475:2-364(+)
QRNWDRVQQSVCRTVKDILEGRGIPPSLNETFLALIPKVEAPQTVKQFRPIGLCNVLYKIVTKTIVNRIKPLLPKLISPTQVSFVPGRQITDNVVIVQEVGKLTWRRPMTGLNGVSLPTH*

Click here to download the sequence:
Link to NCBI Protein BLAST