Transcript Information: S_Transcript_50568.p1


Annotated TAIR IDAT1G72440.1
Annotated Gene NameCCAAT-binding factor
Annotated Gene Symbol(s)EDA25, SWA2
Annotation TypeOrtholog
Chromosome Positionchr1:27268325-27273596 | Reverse length=1043
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1048132380905
Replicate 22.7477466848187
Replicate 32.2068231211146
Condition 2: 8 Hour
Replicate 14.8952055917228
Replicate 23.1959783771038
Replicate 33.2533344940448
Condition 3: 24 Hour
Replicate 12.2938461296595
Replicate 20.71948608178881
Replicate 31.0162728514882


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50568.p1 GENE.S_Transcript_50568~~S_Transcript_50568.p1 ORF type:3prime_partial len:819 (+),score=215.80,CBF|PF03914.13|2.1e+02,CBF|PF03914.13|1.1e-50 S_Transcript_50568:268-2721(+)
ATGACACTGATTTCAGACCCAAAAAGAAACCCCCCAATCAACAACAACAAAACCCTAAACCAACAACCCATAACAAAACCGAAAACCCCACTTCCCAAAAGCCTCAATTTGAAAAACCCACTTCAAAAGAATACAAAAAACCCAACACCCATATCAACAACAGATCAAGTCTTTGTTGGTAACGTGATGTCATCATTTGATAAGTTCAAGAACCTCCCTAAGCTTCCCTTGATTAAAGCTAGTGTCTTGGGGGCATGGCATGAGGATGAGGCTGAGCTGGAGGCCAAAGTTTTGGGGGAAGAAAGAAGGAAAAATTTGGAAATTGGGAATGCTGAGGAATGGAAGAAATTGGTTGATAAGAAGAAAGAGCTTGGGGAAAGGTTGTTGGGTCAGTATACATTGGATTATGAGGCTTCAAGGGGTCAAAGTGGTGATATCAAGATGCTTATTGCCACTCAAAGGTCTGGGACTGCTGCTGATAAGGTTTCGGCTTATTCGGTTTTGATTGGAGATAACCCCATTGCCAATATGAGATCACTTGATGCTCTTTTGGCCATGGTAACATCAAAGGTTGGGAAACGTCATGCTCTAACAGGCTTTGAAGCTCTAAAAGAGTTGTTTCTACAAAGTTTGTTGCCAGACCGTAAATTGAAGACCCTCTTCCAGCAACCCCTTAGCCATCTTCCTGAAACAAAAGATGGTTACTCTCTTCTAATGTTCTGGTACTGGGAGGAATGCTTAAAATTAAGGTATGAACGGTTTGTTTCTGCTCTTGAAGAGGCATCAAGGGACATGTTGCCTATACTAAAAGACAAGGCATTGAAGATAATGTATGCACTTATAAGAAGTAAATCAGAACAAGAGCGAAAGTTACTCACTGCCTTGGTCAACAAGCTTGGGGATCCTAACAGCAAGGCTGCATCAAATGCCGACTATTATTTGACTAACCTTCTGTCTGATCATCCAAACATGAAGGTGGTGGTGATTGATGAGGTGGACTCATTTTTATTTCGCCCGCATCTAGGATTGCGTGCTAAGTATCACGCAGTTAATTTTTTGAGTCAAATTCGCTTGAGTCAGAAGGGGGATGGGCCTAAGGTGGCAAAACGGCTGGTAGATGTATATTTTGCACTATTTAAGGTATTGATCTCTGTGGCAGCTAGTGGTGAAAAAGCCAAGGTTACAGAGACGAAGAAAGGTTCTAACAAGGACAACAAAGTGCAGTATATGTCTGAATCTCACGTGGAATTGGATTCACGACTTTTGTCTGCACTTCTATCAGGTGTAAACAGGGCATTTCCTTTTGTATCTGGGGACGAAGCGGATGAAGTTGTTGACGTTCAAACTCCAATGCTTTTCCAGCTTGTTCATTCACAAAACTTCAATGTCGGCATCCAGGCATTAATGCTTCTTGATAAAATTTCATCAAAAAATCAGGTTGTCAGTGATAGATTTTATCGTGCCTTGTATGCAAAATTGCTAATTCCTGCTGCCTTGAACACCTCTAAGGCAGAGATGTTTATTGGACTACTGTTGAGAGCTATGAAGAATGATATAAATTTAAAGCGTGTAGCTGCCTTCTCAAAACGTCTTCTACAGGTAGCTCTTCAGCAACAACCTCAGTATGCATGTGGGTGTCTGTTTCTCCTCTCTGAAGTTCTGAAAGCAAGGCCACCTTTGTGGAATATGGCAATCCAAAATGAGGCTGTTGATGAAGATCTTGAGCATTTTGAAGATGTGCCTGATGAAACTGAGAATCCACCTGTTATTGATGCTGAGGTGCCACAAAGAAATGACGGTGATACAGGTAGAACTAGTGACCCTGAAAGTGATTCCTCAGAAGACGAGGGAGCCTCTTCAGCATCGTCTTCTGAGGAAGATGAAGATGAGAATTTACTTGTCAAAACAAATGTCGAGGAATTCCAGGAATCCAACTCGAAGTTGTCTGAGCACCTTCAGGAATCGTCTACCAAGCTCTCGCTACCTGGAGGATATGATCCTCGGCGTAGAGAACCTTCATTCTGCAATGCAGACCGTACAAGCTGGTGGGAGCTTACTGTACTTGCCTCTCACACTCACCCATCAGTATCAACCATGGCAAAGACACTTCTTTCTGGTGCAAATATCGTCTACAATGGCAACCCATTGAACGATCTTTCCCTGACTGCTTTTCTTGACAAATTTATGGAAAAGAAGCCTAAGCAGAGCACATGGCATGGTGGCTCACAAATCGAACCAGCTAAGAAGCTTGATATGAACAAGCATTTGATTGGGCCTGAAATCCTTTCATTGGCTGAAGATGATGTGCCCCCTGAAGACGTTATCTTTCATAAGTTCTACATGAACAAGATGAGTACATCAACCAAGCCAAAGAAGAAAAAGAAGAAGAAGAAGGCAGCTGAAGAAGAGGAAGCAGAGGACTTGTATGGTGGAGATGAGAGTGATAATGAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50568.p1 GENE.S_Transcript_50568~~S_Transcript_50568.p1 ORF type:3prime_partial len:819 (+),score=215.80,CBF|PF03914.13|2.1e+02,CBF|PF03914.13|1.1e-50 S_Transcript_50568:268-2721(+)
MTLISDPKRNPPINNNKTLNQQPITKPKTPLPKSLNLKNPLQKNTKNPTPISTTDQVFVGNVMSSFDKFKNLPKLPLIKASVLGAWHEDEAELEAKVLGEERRKNLEIGNAEEWKKLVDKKKELGERLLGQYTLDYEASRGQSGDIKMLIATQRSGTAADKVSAYSVLIGDNPIANMRSLDALLAMVTSKVGKRHALTGFEALKELFLQSLLPDRKLKTLFQQPLSHLPETKDGYSLLMFWYWEECLKLRYERFVSALEEASRDMLPILKDKALKIMYALIRSKSEQERKLLTALVNKLGDPNSKAASNADYYLTNLLSDHPNMKVVVIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSQKGDGPKVAKRLVDVYFALFKVLISVAASGEKAKVTETKKGSNKDNKVQYMSESHVELDSRLLSALLSGVNRAFPFVSGDEADEVVDVQTPMLFQLVHSQNFNVGIQALMLLDKISSKNQVVSDRFYRALYAKLLIPAALNTSKAEMFIGLLLRAMKNDINLKRVAAFSKRLLQVALQQQPQYACGCLFLLSEVLKARPPLWNMAIQNEAVDEDLEHFEDVPDETENPPVIDAEVPQRNDGDTGRTSDPESDSSEDEGASSASSSEEDEDENLLVKTNVEEFQESNSKLSEHLQESSTKLSLPGGYDPRRREPSFCNADRTSWWELTVLASHTHPSVSTMAKTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKKLDMNKHLIGPEILSLAEDDVPPEDVIFHKFYMNKMSTSTKPKKKKKKKKAAEEEEAEDLYGGDESDNEE

Click here to download the sequence:
Link to NCBI Protein BLAST