Transcript Information: S_Transcript_50569.p1


Annotated TAIR IDAT1G72440.1
Annotated Gene NameCCAAT-binding factor
Annotated Gene Symbol(s)EDA25, SWA2
Annotation TypeOrtholog
Chromosome Positionchr1:27268325-27273596 | Reverse length=1043
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6765075527953
Replicate 21.4624477649553
Replicate 30.9063287446798
Condition 2: 8 Hour
Replicate 13.1439718296116
Replicate 22.8380287988682
Replicate 32.4604578378321
Condition 3: 24 Hour
Replicate 10.74896743396323
Replicate 21.4763854398306
Replicate 31.2394833250514


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50569.p1 GENE.S_Transcript_50569~~S_Transcript_50569.p1 ORF type:3prime_partial len:875 (+),score=234.47,CBF|PF03914.13|2.3e+02,CBF|PF03914.13|1.2e-50 S_Transcript_50569:129-2750(+)
ATGACAAACACCAAACCGAAGAAAACCTCCCAATCAAAATCAAAACCTAAAGAAGACGACCTTGACAAAATCCAATCTGATGTAGCTTCATTTGCATCCTCTCTTGGTCTTGCTTCTTCTTCTCTCCCTTCTGGTTTCAATGACACTGATTTCAGACCCAAAAAGAAACCCCCCAATCAACAACAACAAAACCCTAAACCAACAACCCATAACAAAACCGAAAACCCCACTTCCCAAAAGCCTCAATTTGAAAAACCCACTTCAAAAAAACCCTCTTTTAACAATCCCAGATACAACAAAGCCAACACCCATATCAACAACAACAATAACGATCAAGTCTTTGTTGGTAACTCCATGTCATCATTTGATAAGTTCAAGAACCTCCCTAAGCTTCCCTTGATTAAAGCTAGTGTCTTGGGGGCATGGCATGAGGATGAGGCTGAGCTGGAGGCCAAAGTTTTGGGGGAAGAAAGAAGGAAAAATTTGGAAATTGGGAATGCTGAGGAATGGAAGAAATTGGTTGATAAGAAGAAAGAGCTTGGGGAAAGGTTGTTGGGTCAGTACACATTGGATTATGAGGCTTCAAGGGGTCAAAGTGGTGATATCAAGATGCTTATTGCCACTCAAAGGTCTGGGACTGCTGCTGATAAGGTTTCGGCTTATTCGGTTTTGATTGGAGATAACCCCATTGCCAATATGAGATCACTTGATGCTCTTTTGGCCATGGTAACATCAAAGGTTGGGAAACGTCATGCTCTAACAGGCTTTGAAGCTCTAAAAGAGTTGTTTCTACAAAGTTTGTTGCCAGACCGTAAATTGAAGACCCTCTTCCAGCAACCCCTTAGCCATCTTCCTGAAACAAAAGATGGTTACTCTCTTCTAATGTTCTGGTACTGGGAGGAATGCTTAAAATTAAGGTATGAACGGTTTGTTTCTGCTCTTGAAGAGGCATCAAGGGACATGTTGCCTATACTAAAAGACAAGGCATTGAAGATAATGTATGCACTTATAAGAAGTAAATCAGAACAAGAGCGAAAGTTACTCACTGCCTTGGTCAACAAGCTTGGGGATCCTAACAGCAAGGCTGCATCAAATGCCGACTATTATTTGACTAACCTTCTGTCTGATCATCCAAACATGAAGGTGGTGGTGATTGATGAGGTGGACTCATTTTTATTTCGCCCGCATCTAGGATTGCGTGCTAAGTATCACGCAGTTAATTTTTTGAGTCAAATTCGCTTGAGTCAGAAGGGGGATGGGCCTAAGGTGGCAAAACGGCTGGTAGATGTATATTTTGCACTATTTAAGGTATTGATCTCTGTGGCAGCTAGTGGTGAAAAAGCCAAGGTTACAGAGACGAAGAAAGGTTCTAACAAGGACAACAAAGTGCAGTATATGTCTGAATCTCACGTGGAATTGGATTCACGACTTTTGTCTGCACTTCTATCAGGTGTAAACAGGGCATTTCCTTTTGTATCTGGGGACGAAGCGGATGAAGTTGTTGACGTTCAAACTCCAATGCTTTTCCAGCTTGTTCATTCACAAAACTTCAATGTCGGCATCCAGGCATTAATGCTTCTTGATAAAATTTCATCAAAAAATCAGGTTGTCAGTGATAGATTTTATCGTGCCTTGTATGCAAAATTGCTAATTCCTGCTGCCTTGAACACCTCTAAGGCAGAGATGTTTATTGGACTACTGTTGAGAGCTATGAAGAATGATATAAATTTAAAGCGTGTAGCTGCCTTCTCAAAACGTCTTCTACAGGTAGCTCTTCAGCAACAACCTCAGTATGCATGTGGGTGTCTGTTTCTCCTCTCTGAAGTTCTGAAAGCAAGGCCACCTTTGTGGAATATGGCAATCCAAAATGAGGCTGTTGATGAAGATCTTGAGCATTTTGAAGATGTGCCTGATGAAACTGAGAATCCACCTGTTATTGATGCTGAGGTGCCACAAAGAAATGACGGTGATACAGGTAGAACTAGTGACCCTGAAAGTGATTCCTCAGAAGACGAGGGAGCCTCTTCAGCATCGTCTTCTGAGGAAGATGAAGATGAGAATTTACTTGTCAAAACAAATGTCGAGGAATTCCAGGAATCCAACTCGAAGTTGTCTGAGCACCTTCAGGAATCGTCTACCAAGCTCTCGCTACCTGGAGGATATGATCCTCGGCGTAGAGAACCTTCATTCTGCAATGCAGACCGTACAAGCTGGTGGGAGCTTACTGTACTTGCCTCTCACACTCACCCATCAGTATCAACCATGGCAAAGACACTTCTTTCTGGTGCAAATATCGTCTACAATGGCAACCCATTGAACGATCTTTCCCTGACTGCTTTTCTTGACAAATTTATGGAAAAGAAGCCTAAGCAGAGCACATGGCATGGTGGCTCACAAATCGAACCAGCTAAGAAGCTTGATATGAACAAGCATTTGATTGGGCCTGAAATCCTTTCATTGGCTGAAGATGATGTGCCCCCTGAAGACGTTATCTTTCATAAGTTCTACATGAACAAGATGAGTACATCAACCAAGCCAAAGAAGAAAAAGAAGAAGAAGAAGGCAGCTGAAGAAGAGGAAGCAGAGGACTTGTATGGTGGAGATGAGAGTGATAATGAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50569.p1 GENE.S_Transcript_50569~~S_Transcript_50569.p1 ORF type:3prime_partial len:875 (+),score=234.47,CBF|PF03914.13|2.3e+02,CBF|PF03914.13|1.2e-50 S_Transcript_50569:129-2750(+)
MTNTKPKKTSQSKSKPKEDDLDKIQSDVASFASSLGLASSSLPSGFNDTDFRPKKKPPNQQQQNPKPTTHNKTENPTSQKPQFEKPTSKKPSFNNPRYNKANTHINNNNNDQVFVGNSMSSFDKFKNLPKLPLIKASVLGAWHEDEAELEAKVLGEERRKNLEIGNAEEWKKLVDKKKELGERLLGQYTLDYEASRGQSGDIKMLIATQRSGTAADKVSAYSVLIGDNPIANMRSLDALLAMVTSKVGKRHALTGFEALKELFLQSLLPDRKLKTLFQQPLSHLPETKDGYSLLMFWYWEECLKLRYERFVSALEEASRDMLPILKDKALKIMYALIRSKSEQERKLLTALVNKLGDPNSKAASNADYYLTNLLSDHPNMKVVVIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSQKGDGPKVAKRLVDVYFALFKVLISVAASGEKAKVTETKKGSNKDNKVQYMSESHVELDSRLLSALLSGVNRAFPFVSGDEADEVVDVQTPMLFQLVHSQNFNVGIQALMLLDKISSKNQVVSDRFYRALYAKLLIPAALNTSKAEMFIGLLLRAMKNDINLKRVAAFSKRLLQVALQQQPQYACGCLFLLSEVLKARPPLWNMAIQNEAVDEDLEHFEDVPDETENPPVIDAEVPQRNDGDTGRTSDPESDSSEDEGASSASSSEEDEDENLLVKTNVEEFQESNSKLSEHLQESSTKLSLPGGYDPRRREPSFCNADRTSWWELTVLASHTHPSVSTMAKTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKKLDMNKHLIGPEILSLAEDDVPPEDVIFHKFYMNKMSTSTKPKKKKKKKKAAEEEEAEDLYGGDESDNEE

Click here to download the sequence:
Link to NCBI Protein BLAST