Transcript Information: S_Transcript_5060.p1


Annotated TAIR IDAT3G28860.1
Annotated Gene NameATP binding cassette subfamily B19
Annotated Gene Symbol(s)ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB
Annotation TypeOrtholog
Chromosome Positionchr3:10870287-10877286 | Reverse length=1252
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.021913691765
Replicate 29.4607918153117
Replicate 36.6965621331355
Condition 2: 8 Hour
Replicate 19.4859360467112
Replicate 27.3693284061778
Replicate 313.001409996636
Condition 3: 24 Hour
Replicate 12.1347990605804
Replicate 24.8497119969606
Replicate 35.8433548537548


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5060.p1 GENE.S_Transcript_5060~~S_Transcript_5060.p1 ORF type:3prime_partial len:1187 (+),score=241.75,ABC_membrane|PF00664.19|3.1e-57,ABC_membrane|PF00664.19|1.7e-51,ABC_tran|PF00005.23|1.9e-32,ABC_tran|PF00005.23|1e-31,SMC_N|PF02463.15|31,SMC_N|PF02463.15|0.00074,SMC_N|PF02463.15|3.2,SMC_N|PF02463.15|4.1,AAA_21|PF13304.2|1.3,AAA_21|PF13304.2|5,AAA_21|PF13304.2|0.52,AAA_21|PF13304.2|22,AAA_29|PF13555.2|0.041,AAA_29|PF13555.2|0.048,AAA_16|PF13191.2|0.01,AAA_16|PF13191.2|0.25,AAA_17|PF13207.2|0.0079,AAA_17|PF13207.2|3.9,Zeta_toxin|PF06414.8|0.05,Zeta_toxin|PF06414.8|0.33 S_Transcript_5060:434-3991(+)
ATGGCACAGAATAGTGGTAGTGGTGGAAATGATCATCAGGGAAAGGCAATGCCAGAAGCAGAGAAGAAAAAAGAGCAAACATTGCCATTTTATCAGCTCTTTTCTTTTGCTGATAAATATGATTACTTTTTAATGGGTTTGGGTAGCTTAGGTGCTGTTATTCATGGCTCTTCTATGCCTGTTTTTTTCCTCCTTTTTGGTCAAATGGTTAATGGCTTCGGCAAAAACCAATCTGATCTCAACTCCATGGTTCATGAAGTCTCCAAGTATGCTCTGTATTTTGTCTACCTGGGGCTCATTGTTTGTGCATCTTCCTACGCAGAAATTGCTTGTTGGATGTACTCTGGGGAGAGACAAGCTGGAACTTTGAGAAAGAAGTATTTGGAGGCAGTTTTAAAGCAAGATGTTGGGTTCTTTGACACTGATGCTAGAACTGGTGACATCGTATTCAGTGTTTCTACTGATACTCTTCTTGTGCAAGATGCCATTAGTGAGAAGGTGGGGAATTTCATACATTATCTATCGACATTTTTGGCGGGATTGGTGGTTGGTTTTGTGTCAGCTTGGAAGCTAGCATTACTTAGTGTGGCAGTTATACCTGGAATTGCATTTGCTGGAGGCCTTTATGCTTATACTCTTACTGGCTTGACGTCAAAGAGTCGTGAATCTTATGCCAATGCCGGTATTATTGCTGAACAGGCCATTGCACAAGTACGGACGGTATACTCGTATGTTGGTGAGAGCAAGGCCCTTAATTCCTATTCTGATGCTATTCAAAATACCCTTAAGCTGGGCTACAAAGCTGGAATGGCAAAGGGTTTGGGGCTCGGATGTACCTATGGAATTGCTTGCATGTCATGGGCTCTTGTTTTCTGGTATGCTGGCGTTTTCATTAGGAACGGGCAAACTGATGGAGGGAAGGCATTCACCGCCATTTTTTCTGCCATTGTTGGTGGCATGAGTTTAGGCCAGTCGTTCTCGAACCTTGGAGCATTTAGCAAAGGAAAAGCAGCTGGGTACAAGTTAATGGAAATTATCAAACAAAAGCCCACCATAGTTGAAGACAAGTGTGATGGAAAGTGTTTGGATGAAGTTAGTGGAAATATAGAATTCAAGAATGTATCATTCAGCTATCCGTCTCGTCCTGATGTCATGATCTTCCGAGACTTCTCATTGTTCTTCCCTGCTGGAAAGACTGTTGCAGTAGTCGGTGGTAGTGGATCAGGAAAGAGTACCGTGGTCTCACTCATAGAGAGGTTCTATGATCCTAATGATGGGCAGGTTTTGCTGGATAATGTTGACATCAGAACACTGCAACTGAGATGGTTGCGCGGTCAAATTGGCCTGGTGAACCAAGAACCAGCTCTTTTCGCCACCACTATACTCGAGAATATTTTGTATGGAAAACCCGATGCTACAATGGCTGAAGTTGAAGCTGCTGCCTGTGCTGCAAATGCTCATAGCTTCATTACTCTGCTACCACATGGATACAACACTCATGTGGGTGAGAGGGGTGTCCAGCTTTCAGGAGGGCAGAAACAGAGAATTGCGATAGCAAGAGCAATGTTAAAGAACCCGAAAATTCTCCTCTTGGATGAAGCCACAAGTGCTTTAGATGCAAGCTCCGAGAGCATAGTACAAGAAGCCTTGGACAGGTTGATGGTTGGAAGAACCACTGTGGTAGTTGCTCACCGTCTTTCCACCATCAGAAACGTTGACACGATTGCTGTAATTCAGCAAGGACAAGTTGTGGAGACTGGCACTCATGAGGAACTAATAGCCAAAGCCGGTGCTTATGCATCGCTTATTCGGTTCCAAGAGATGGTTGGAAATAGGGACTTCTCAAACCCTTCAACCCGTCGTACACGCTCATCACGGTTAAGCCATTCTCTCTCCACTAAATCCTTAAGCCTTCGGGCTGGTAGTTTAAGGAACTTGAGCTACTCATATAGCACAGGTGCTGATGGCCGAATTGAGATGGTATCAGCTGCTGAGACTGAGAGGAAAAACCCTGCACCACGAGGATATTTCTGCCGGCTTCTAAAACTTAACGCTCCTGAATGGCCTTACTCAATCATGGGTGCTGTTGGATCCATACTCTCCGGTTTCATTGGTCCGACCTTTGCAATCGTGATGAGTAATATGATCGAGGTTTTCTACTACAGTAACTATGCCTCGATGGAGAGAAAAACTAAGGAATATGTCTTCATTTACATTGGGGCTGGTCTTTATGCTGTTGTTGCATACTTAATCCAACATTACTTCTTTAGCATCATGGGTGAAAACCTCACAACCAGAGTGAGGAGGATGATGCTTGCAGCGATTCTGAGGAATGAAGTCGGATGGTTCGATGAGGAGGAGCACAACTCCAGCCTCCTAGCAGCTCGCCTAGCGACTGATGCAGCTGATGTGAAATCCGCTATTGCCGAAAGGATCTCCGTAATATTGCAAAACATGACTTCTCTTCTCACATCCTTCATTGTCGCCTTCATCGTCGAGTGGAGAGTCTCTCTTCTCATTCTAGGAACATTCCCACTACTAGTCCTTGCAAACTTTGCTCAGCAATTGTTTCTGAAAGGATTTGCAGGAGACACAGCAAAGGCACATGCAAAGACGAGCATGATAGCAGGTGAGGGAGTGAGCAACATCCGAACTGTGGCTGCATTCAATGCCCAGGAGAAGATCCTGTCTCTCTTTAGCCAAGAGCTCCGGGCCCCGCAGCGCCGCAGCCTGCGCCGAAGTCAAACATCTGGGGGTCTATTTGGCATTTCTCAGCTTGCTCTCTATGGATCCGAAGCCCTCATCCTGTGGTATGGTGCTCATCTAGTAAGCAAAGGGCTGTCCACATTCTCGAAGGTCATCAAGGTGTTTGTGGTCTTGGTCATTACGGCCAACTCAGTAGCTGAAACAGTCAGCCTCACACCAGAGATCATCCGGGGTGGTGAAGCTGTGGGGTCCGTCTTTTCCATCCTGGACCGTACTACTAGAATTGACCCGGATGATTCAGAAGCCGAACCTGTGGAAACCATTCGTGGGGAGATTGAATTCCGTCATGTTGATTTTGCATACCCTACTCGCCCGGATGTCCTTGTGTTCAAGGATTTCAGCCTAAGGATCCGAGCTGGTCAGAGTCAAGCCCTTGTTGGAGCTAGTGGTTCAGGGAAGAGCTCCGTCATTGCATTGATCGAGAGATTCTATGACCCGTGTGCTGGTAAAGTCATGATCGATGGCAAGGACATTAGGAGACTGAACCTTAAATCTCTAAGGCTTAAGATCGGTTTGGTGCAACAGGAGCCAGCTCTTTTTGCTTCCAGTATATTCGAGAACATTGCATATGGGAAAGGGGGAGGAGCAACAGAGGCCGAAGTCATCGAAGCTGCTCGAGCAGCCAATGTCCATGGTTTTGTGAGCGCATTGCCTGATGGTTACAAAACAGCAGTGGGGGAGAGAGGGGTTCAACTATCTGGAGGCCAGAAACAAAGGATTGCCATCGCTCGGGCGGTGCTCAAGGACCCCGCCATCCTGCTATTGGATGAGGCCACGAGCGCCCTCGATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5060.p1 GENE.S_Transcript_5060~~S_Transcript_5060.p1 ORF type:3prime_partial len:1187 (+),score=241.75,ABC_membrane|PF00664.19|3.1e-57,ABC_membrane|PF00664.19|1.7e-51,ABC_tran|PF00005.23|1.9e-32,ABC_tran|PF00005.23|1e-31,SMC_N|PF02463.15|31,SMC_N|PF02463.15|0.00074,SMC_N|PF02463.15|3.2,SMC_N|PF02463.15|4.1,AAA_21|PF13304.2|1.3,AAA_21|PF13304.2|5,AAA_21|PF13304.2|0.52,AAA_21|PF13304.2|22,AAA_29|PF13555.2|0.041,AAA_29|PF13555.2|0.048,AAA_16|PF13191.2|0.01,AAA_16|PF13191.2|0.25,AAA_17|PF13207.2|0.0079,AAA_17|PF13207.2|3.9,Zeta_toxin|PF06414.8|0.05,Zeta_toxin|PF06414.8|0.33 S_Transcript_5060:434-3991(+)
MAQNSGSGGNDHQGKAMPEAEKKKEQTLPFYQLFSFADKYDYFLMGLGSLGAVIHGSSMPVFFLLFGQMVNGFGKNQSDLNSMVHEVSKYALYFVYLGLIVCASSYAEIACWMYSGERQAGTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWKLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDKCDGKCLDEVSGNIEFKNVSFSYPSRPDVMIFRDFSLFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNDGQVLLDNVDIRTLQLRWLRGQIGLVNQEPALFATTILENILYGKPDATMAEVEAAACAANAHSFITLLPHGYNTHVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDASSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGAYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRAGSLRNLSYSYSTGADGRIEMVSAAETERKNPAPRGYFCRLLKLNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYSNYASMERKTKEYVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLLAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLFLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQEKILSLFSQELRAPQRRSLRRSQTSGGLFGISQLALYGSEALILWYGAHLVSKGLSTFSKVIKVFVVLVITANSVAETVSLTPEIIRGGEAVGSVFSILDRTTRIDPDDSEAEPVETIRGEIEFRHVDFAYPTRPDVLVFKDFSLRIRAGQSQALVGASGSGKSSVIALIERFYDPCAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFASSIFENIAYGKGGGATEAEVIEAARAANVHGFVSALPDGYKTAVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDA

Click here to download the sequence:
Link to NCBI Protein BLAST