Transcript Information: S_Transcript_506413.p3


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.50177388981489
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_506413.p3 GENE.S_Transcript_506413~~S_Transcript_506413.p3 ORF type:internal len:85 (+),score=28.33,HMG_box|PF00505.15|4.4e+03,HMG_box|PF00505.15|3.9e-13,HMG_box_2|PF09011.6|1.8e+03,HMG_box_2|PF09011.6|7e-09 S_Transcript_506413:3-254(+)
GGCGACGATGCACCAAAGGCACAAACAAAGAAGCGTGCCGCAGCTGGTGAAAAGAAGGAAGCGAAGGCCAAGAAGCCACGTAAGGCTGCTGGCAAGAAGAAGAAGACTGGTCCAAAGCGTGGTTTATCAGCATATATGTTCTTCTCCAAGGAAAAGCGTCCCCAATTAAAGGAAGAAGATGAAAACTTATCATTTGGTGAATTAGGTACTGCAGTAGGTGCCGCATGGCGCGAATTATCAGCCGAAGAAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_506413.p3 GENE.S_Transcript_506413~~S_Transcript_506413.p3 ORF type:internal len:85 (+),score=28.33,HMG_box|PF00505.15|4.4e+03,HMG_box|PF00505.15|3.9e-13,HMG_box_2|PF09011.6|1.8e+03,HMG_box_2|PF09011.6|7e-09 S_Transcript_506413:3-254(+)
GDDAPKAQTKKRAAAGEKKEAKAKKPRKAAGKKKKTGPKRGLSAYMFFSKEKRPQLKEEDENLSFGELGTAVGAAWRELSAEEK

Click here to download the sequence:
Link to NCBI Protein BLAST