Transcript Information: S_Transcript_50664.p1


Annotated TAIR IDAT3G16840.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5738020-5743042 | Reverse length=826
E-Value1.1E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0582307623739
Replicate 27.8019139884545
Replicate 38.232409730071
Condition 2: 8 Hour
Replicate 19.1791897452007
Replicate 29.4026610224938
Replicate 36.6418945435811
Condition 3: 24 Hour
Replicate 16.7750798072278
Replicate 26.0765291907598
Replicate 35.9582510696144


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50664.p1 GENE.S_Transcript_50664~~S_Transcript_50664.p1 ORF type:5prime_partial len:690 (+),score=169.91,DEAD|PF00270.25|2.5e-41,DEAD|PF00270.25|7.5e+02,Helicase_C|PF00271.27|0.98,Helicase_C|PF00271.27|1.8e+03,Helicase_C|PF00271.27|3.5e-25 S_Transcript_50664:3-2072(+)
AAAAAGGAGAGAAATTTTTTGAAAAACACAGAGAGGCGAGGCACTGTGAAGCTAAAATCGTTGCAGTTGAAGACGTTGCTCCTCGCCGTACGTAGCCAAGCTAGCTTCTCAGCTTCAGTTCTCCGTCATACACTCCTCCATATTCCGATGGGCAAGCCCAGAAGACGTGAGATTCGCAGTCACAGTCGAAGCAAGCACAACGAAAACCTTGATGAACTTCTATGGAACTCCTCTCTTCCTATCTCCGACGATCCTTTCTCTTTCTTCTCCGCCCCTGGCCCCACCCTCGAAGGAGGGTTTATGTCATTGGAGGAGATTGATGAATCACAGTACAATTTGGTGATTCCTGAACCTAATGAGGGTAATAAGAAAGAAACAGCAGGGAAGTCCTCCAAAACAAAGAAACGGAAACAGGAAGAAACTGATGGTGATGAAGATGGCGGTGTCGTTGAAATGGAGGCTGAGGAAAATACTGATGATGAGGATGATATGAAGCAAAAGAAGAGGAAGAAGAAGAAGAGAAAGAAGAATGACAACAAAAAAAAGAAACAGAAGTCAGAACAAGCAGAAATAACTAGTGAGTCAGTGACTGTTACTGAAACCAAGGATGAAGAAGGTGAGGAGTCAGTTGATGAAGATGAATTTAATGCGTGGAATGAGCTGAGGCTCCATCCATTACTCATGAAAGCAATCTACAAACTTGGGTTTAAGGAGCCCACACCTATACAAAAGGCTTGTATACCTGCTGCAGCTCATCAGGGAAAGGATGTTATTGGTGCTGCAGTGACTGGATCTGGGAAAACTCTTGCTTTTGGCCTGCCAATCTTGCAGCGCCTTCTTGATGAGCAAGAAAAGGTAGAAAAGCTTATGTTAGAGGATGAACAGGGTGTTCAGAAAGTTGCACCAAGACACTTGTTACGGGCTTTGATAATAACACCTACAAGAGAACTTGCTGTTCAGGTTAGTAGTCATCTTAAAGCAGCAGCCAGAGGTACTGGATTTCGGGTGGTTGCTATTATTGGTGGAATGTCTACAGAGAAGCAGGAGAGGCTTTTGAGAACAAGGCCAGAGATAATTATTGGAACTCCTGGAAGGCTGTGGGAACTTATGTCAAGAGGTGAAACCCATCTCTCTGAGTTACATTCATTATCCTTCTTTGTGCTGGATGAAGCGGATCGAATGATAGAGAATGGCCATTTTCGTGAATTACAGTCCATAATTGACATGCTTCCTATGGCTAGTGGATTGGTTGAAGAGCATTCCCAGAATGTACAGAATTGTGTAACCGTCTCTAGCAGCCAGAGAAAGAAACGACAAACATTTGTGTTCTCTGCAACAATTGCACTATCTTCTGACTTTCGAAAGAAACTAAAGCGTGGAACTCTTAAATCTCAAAAGTCGATGGTTGATGGATTGTCATCTATAGAAGCTTTATCAGAACGAGCAGGAATGAGACCAGATGCTTCCATTATTGACTTGACTACCGCATCCATAATGCCCATTAATCTTGAGGAGTCATTTCTTGAGTGTAGGGAAGAAGATAAAGATGCCTACTTGTATTACATCTTGTCTGTTCATGGGCAAGGCAAAACGATTGTGTTCTGCACATCAATTGCTAGTCTACGCCATGTTGCTGCCCTTTTGCGCATTCTCAAAATCAGGATTTACACCTTTCATGCTGAGATGCAACAAAGGGCTCGCCTTAAGGCAATGGATCGCTTTCATGAGGATGAACATGGAATACTTGTAGCTGCTGATGGTGCAGCAAGAGGTCTTGACATAATTGGCGTTCGCACTGTCATCCACTATCAACTTCCACATTCTGCAGAGGTTTATGTTCATAGATGTGGACGAACTGCAAGAGCTTCCACGGATGGGTGCAGTGTAGCATTAATCTCAGCAAATGAGAGATCAAAGTTTGCCTCTTTGTGCAAATCGTTTGCAAAGGACACTCTTCAGCGTTTTCCCATTGAAAGTTCTTACATGCCAGAGGTTATGAAAAGATTATCTCTTGCACGTCAAATTGATAAGATTTCCCGGAAGGAGTCGCAGGTATTGAACTGCGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50664.p1 GENE.S_Transcript_50664~~S_Transcript_50664.p1 ORF type:5prime_partial len:690 (+),score=169.91,DEAD|PF00270.25|2.5e-41,DEAD|PF00270.25|7.5e+02,Helicase_C|PF00271.27|0.98,Helicase_C|PF00271.27|1.8e+03,Helicase_C|PF00271.27|3.5e-25 S_Transcript_50664:3-2072(+)
KKERNFLKNTERRGTVKLKSLQLKTLLLAVRSQASFSASVLRHTLLHIPMGKPRRREIRSHSRSKHNENLDELLWNSSLPISDDPFSFFSAPGPTLEGGFMSLEEIDESQYNLVIPEPNEGNKKETAGKSSKTKKRKQEETDGDEDGGVVEMEAEENTDDEDDMKQKKRKKKKRKKNDNKKKKQKSEQAEITSESVTVTETKDEEGEESVDEDEFNAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAVTGSGKTLAFGLPILQRLLDEQEKVEKLMLEDEQGVQKVAPRHLLRALIITPTRELAVQVSSHLKAAARGTGFRVVAIIGGMSTEKQERLLRTRPEIIIGTPGRLWELMSRGETHLSELHSLSFFVLDEADRMIENGHFRELQSIIDMLPMASGLVEEHSQNVQNCVTVSSSQRKKRQTFVFSATIALSSDFRKKLKRGTLKSQKSMVDGLSSIEALSERAGMRPDASIIDLTTASIMPINLEESFLECREEDKDAYLYYILSVHGQGKTIVFCTSIASLRHVAALLRILKIRIYTFHAEMQQRARLKAMDRFHEDEHGILVAADGAARGLDIIGVRTVIHYQLPHSAEVYVHRCGRTARASTDGCSVALISANERSKFASLCKSFAKDTLQRFPIESSYMPEVMKRLSLARQIDKISRKESQVLNCG*

Click here to download the sequence:
Link to NCBI Protein BLAST