Transcript Information: S_Transcript_506719.p2


Annotated TAIR IDAT1G24620.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8723893-8724453 | Reverse length=186
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.26581674165681
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.25681744102387
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_506719.p2 GENE.S_Transcript_506719~~S_Transcript_506719.p2 ORF type:5prime_partial len:83 (+),score=26.14,EF-hand_1|PF00036.28|0.00099,EF-hand_1|PF00036.28|5.5e-06,EF-hand_7|PF13499.2|2.3e-10,EF-hand_6|PF13405.2|0.0055,EF-hand_6|PF13405.2|0.039,EF-hand_5|PF13202.2|9.7e-05,EF-hand_5|PF13202.2|8.4,EF-hand_8|PF13833.2|0.51,EF-hand_8|PF13833.2|0.00092 S_Transcript_506719:1-249(+)
GCCGAGGCTGCCGCCACGTTTGGCAAGTTTGATGCAAATGAGGACAACAGGCTGGAGTTTTCAGAGTTCAAGCAGCTCTGCAATGCAGCAGACTTCAACTTGTCGGACGAAGAGAGCAAGAAAGCGATCGAGCTGCTGGACAAACGCGGCTCCGGCTATGTTGAGTTTGACGAGTTCTGCGCCTGGTGGGTGGATCAGAACCAGCCCATGCAGGCAGCTGAAAAGCAAGCTGAGAAAACGGCAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_506719.p2 GENE.S_Transcript_506719~~S_Transcript_506719.p2 ORF type:5prime_partial len:83 (+),score=26.14,EF-hand_1|PF00036.28|0.00099,EF-hand_1|PF00036.28|5.5e-06,EF-hand_7|PF13499.2|2.3e-10,EF-hand_6|PF13405.2|0.0055,EF-hand_6|PF13405.2|0.039,EF-hand_5|PF13202.2|9.7e-05,EF-hand_5|PF13202.2|8.4,EF-hand_8|PF13833.2|0.51,EF-hand_8|PF13833.2|0.00092 S_Transcript_506719:1-249(+)
AEAAATFGKFDANEDNRLEFSEFKQLCNAADFNLSDEESKKAIELLDKRGSGYVEFDEFCAWWVDQNQPMQAAEKQAEKTAA*

Click here to download the sequence:
Link to NCBI Protein BLAST