Transcript Information: S_Transcript_50707.p1


Annotated TAIR IDAT1G53650.1
Annotated Gene NameCTC-interacting domain 8
Annotated Gene Symbol(s)CID8
Annotation TypeOrtholog
Chromosome Positionchr1:20029262-20031243 | Reverse length=314
E-Value6.8E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.599172616697
Replicate 223.953885805302
Replicate 322.716766985514
Condition 2: 8 Hour
Replicate 122.340885094139
Replicate 224.502500891129
Replicate 323.61660575917
Condition 3: 24 Hour
Replicate 126.421906698147
Replicate 227.556316932511
Replicate 324.741624511685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50707.p1 GENE.S_Transcript_50707~~S_Transcript_50707.p1 ORF type:complete len:315 (+),score=73.37,RRM_1|PF00076.18|2e-12,RRM_1|PF00076.18|3.5e-08,RRM_6|PF14259.2|4.4e-10,RRM_6|PF14259.2|6.1e-08,RRM_5|PF13893.2|0.019,RRM_5|PF13893.2|0.0029 S_Transcript_50707:610-1554(+)
ATGGCTGCTGTTGCACAAAATGTTGTGAATTCTGATGATCAGTTCACTAAGGATTGCAACTCACCTACCCACAACAACAACAACAACAACTCTGAAACTGACACTAAAAGTTCGGATTCAAAATCAGAACTCCATAAGAACATTAATGAGCTTGCTGACATCTTGTCCAAGTTAAATCCTTGGGCTAAGGAGTTTGTTCCTTCTTCTTACCGTCAGAAGAATGATCAGAACATTTTCCCTGTTGCCCCTAACAAGATTTCTGCTAATGACAATTTTCCCAACAATCGCAGGAGGAGAAATAATTTTAACCAGGGGAGGAGAAGGATGAATGGAAGAGCTTTCAGAGCTCAGCGAGAGGAAAGCATTAGGCGCACAGTATATGTCTCTGACATTGACCAGCATGTTACTGAAGAGAGGCTAGCTGCTTTGTTTAGTAGTTGTGGACAGGTTGTTGACTGCCGAATTTGTGGTGACCCTCATTCGGTTCTTCGTTTTGCTTTTGTAGAGTTTGCTGATGAACATGGTGCTAGAGCTGCTTTAAATCTTGGTGGGACTATGCTGGGATACTACCCAGTTAGAGTCTTGCCTTCGAAAACTGCCATACTCCCTGTTAATCCTACATTTCTTCCCAGGTCTGAAGATGAGAGAGAAATGTGTGCTAGGACTGTCTACTGTACAAATATTGATAAAAAGGTTTCTCAGGTTGATGTCAAGAATTTCTTTGAAAGTGCTTGTGGTGAGGTTTCTCGTCTGAGGCTTTTGGGGGACAATGTCCATTCTACTCGTATTGCCTTTGTTGAATTTACAATGGCTGAAAGTGCTATTATGGCCCTGAACTGCAGTGGAATGATTTTGGGAACCCAGCCCATAAGGGTGAGTCCTTCGAAGACGCCAGTGAGGCCGCGACTCCCTCGCCCCACATCAATTATCCCGCCATGCGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50707.p1 GENE.S_Transcript_50707~~S_Transcript_50707.p1 ORF type:complete len:315 (+),score=73.37,RRM_1|PF00076.18|2e-12,RRM_1|PF00076.18|3.5e-08,RRM_6|PF14259.2|4.4e-10,RRM_6|PF14259.2|6.1e-08,RRM_5|PF13893.2|0.019,RRM_5|PF13893.2|0.0029 S_Transcript_50707:610-1554(+)
MAAVAQNVVNSDDQFTKDCNSPTHNNNNNNSETDTKSSDSKSELHKNINELADILSKLNPWAKEFVPSSYRQKNDQNIFPVAPNKISANDNFPNNRRRRNNFNQGRRRMNGRAFRAQREESIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRICGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQVDVKNFFESACGEVSRLRLLGDNVHSTRIAFVEFTMAESAIMALNCSGMILGTQPIRVSPSKTPVRPRLPRPTSIIPPCG*

Click here to download the sequence:
Link to NCBI Protein BLAST